RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 P2RY8Q86VZ1 359 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 DCP2Q8IU60 420 aaKnown RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 PEX5LQ8IYB4 626 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 RORBQ92753 470 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 EML4Q9HC35 981 aaKnown RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 ZBTB20Q9HC78 741 aaPredicted RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 MOV10Q9HCE1 1003 aaKnown RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 CPNE5Q9HCH3 593 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 I6L893 689 aaPredicted RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 DNTTP04053 509 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 ABCB1P08183 1280 aaPredicted RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 ERCC2P18074 760 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 CHRNA4P43681 627 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 MAP3K7CLP57077 242 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 MTPNP58546 118 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 CAP1Q01518 475 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 IL1RL1Q01638 556 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 NKG7Q16617 165 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 PKDCCQ504Y2 493 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 SOWAHCQ53LP3 525 aaPredicted RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 ATAD3CQ5T2N8 411 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 GDF6Q6KF10 455 aaPredicted RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 GALNT5Q7Z7M9 940 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 ASCC1Q8N9N2 400 aaKnown RBP16.11■□□□□ 0.17
LINC00554-201ENST00000564841 CITED4Q96RK1 184 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 TMEM246Q9BRR3 403 aa16.11■□□□□ 0.17
LINC00554-201ENST00000564841 MITFO75030 526 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 DAB1O75553 588 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 CD4P01730 458 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 FTH1P02794 183 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 UFM1P61960 85 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 GALK2Q01415 458 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 SYT16Q17RD7 645 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 ENPP6Q6UWR7 440 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 PIM3Q86V86 326 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 METTL4Q8N3J2 472 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 CADM2Q8N3J6 435 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 PIK3C3Q8NEB9 887 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 OSCP1Q8WVF1 389 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 CENPIQ92674 756 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 PPM1MQ96MI6 270 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MED10Q9BTT4 135 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 REXO4Q9GZR2 422 aaKnown RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MID1IP1Q9NPA3 183 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 G3V2T6 193 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 M0QZ92 97 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MEN1O00255 615 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 HS6ST1O60243 411 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 ITIH1P19827 911 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MASP1P48740 699 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 ISL1P61371 349 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 IL5RAQ01344 420 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 CDC20Q12834 499 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 PSMD5Q16401 504 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 TTC23LQ6PF05 361 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 TMEM179BQ7Z7N9 219 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 IQCF2Q8IXL9 164 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 RIMKLAQ8IXN7 391 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 AFAP1L2Q8N4X5 818 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 DTWD1Q8N5C7 304 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 IPMKQ8NFU5 416 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 OR52K2Q8NGK3 314 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 LGALS12Q96DT0 336 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 ZNF300Q96RE9 604 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 IRF2BPLQ9H1B7 796 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 RNF167Q9H6Y7 350 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 HACD3Q9P035 362 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.1■□□□□ 0.17
LINC00554-201ENST00000564841 ST3GAL5Q9UNP4 418 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 MICAL3Q7RTP6 2002 aa16.1■□□□□ 0.17
LINC00554-201ENST00000564841 SHROOM3Q8TF72 1996 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 CASTOR2A6NHX0 329 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 EEF2KO00418 725 aaKnown RBP16.09■□□□□ 0.17
LINC00554-201ENST00000564841 SCO2O43819 266 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 PRSS23O95084 383 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 CRYZL1O95825 349 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 C1RP00736 705 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 FYNP06241 537 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 CPB1P15086 417 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 THPOP40225 353 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 DNAJB13P59910 316 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 TRIP4Q15650 581 aaPredicted RBP16.09■□□□□ 0.17
LINC00554-201ENST00000564841 GPR158Q5T848 1215 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 ZCCHC8Q6NZY4 707 aaKnown RBP16.09■□□□□ 0.17
LINC00554-201ENST00000564841 C11orf74Q86VG3 221 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 ZDHHC13Q8IUH4 622 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 DCP1BQ8IZD4 617 aaKnown RBP16.09■□□□□ 0.17
LINC00554-201ENST00000564841 HCAR2Q8TDS4 363 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 PYCR2Q96C36 320 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 ASPSCR1Q9BZE9 553 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 SLC52A3Q9NQ40 469 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
LINC00554-201ENST00000564841 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
LINC00554-201ENST00000564841 SLC22A1O15245 554 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms