RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 GAS2L3Q86XJ1 694 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 LRRC57Q8N9N7 239 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 DDHD1Q8NEL9 900 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 OR4K2Q8NGD2 314 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 ZNF398Q8TD17 642 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 RSC1A1Q92681 617 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 RTP4Q96DX8 246 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 MED8Q96G25 268 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 SPATA13Q96N96 652 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 TEFMQ96QE5 360 aaKnown RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 UCK1Q9HA47 277 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 FKBPLQ9UIM3 349 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 WDR37Q9Y2I8 494 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 AAR2Q9Y312 384 aaKnown RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 KCTD3Q9Y597 815 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 MN1Q10571 1320 aaPredicted RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 A0A0U1RQJ8 604 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 PRR19A6NJB7 356 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 CAPN5O15484 640 aaPredicted RBP17.35■□□□□ 0.37
NME3-205ENST00000563854 PPFIA2O75334 1257 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 FTCDO95954 541 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 LIFP15018 202 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 LEPRP48357 1165 aaKnown RBP17.35■□□□□ 0.37
NME3-205ENST00000563854 NFE2L1Q14494 772 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 TAF1AQ15573 450 aaPredicted RBP17.35■□□□□ 0.37
NME3-205ENST00000563854 AGAP9Q5VTM2 703 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 IRGCQ6NXR0 463 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 FAM83HQ6ZRV2 1179 aaPredicted RBP17.35■□□□□ 0.37
NME3-205ENST00000563854 UBL4BQ8N7F7 174 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 BEND7Q8N7W2 519 aaPredicted RBP17.35■□□□□ 0.37
NME3-205ENST00000563854 GPR150Q8NGU9 434 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 C9orf72Q96LT7 481 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 TBL1YQ9BQ87 522 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 ASB8Q9H765 288 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 SLC40A1Q9NP59 571 aa17.35■□□□□ 0.37
NME3-205ENST00000563854 GCN1Q92616 2671 aaKnown RBP17.34■□□□□ 0.37
NME3-205ENST00000563854 GOLGA6L9A6NEM1 432 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 POLR1CO15160 346 aaPredicted RBP17.34■□□□□ 0.37
NME3-205ENST00000563854 FAM87AP0C7U9 286 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 PLA2G2AP14555 144 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 ADRA1AP35348 466 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 KIF5AQ12840 1032 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 PLCL1Q15111 1095 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 LONRF2Q1L5Z9 754 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 LINC00303Q3SY05 128 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 WASH2PQ6VEQ5 465 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 RANBP10Q6VN20 620 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 ARHGEF18Q6ZSZ5 1173 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 FAM92BQ6ZTR7 304 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 TAB3Q8N5C8 712 aaPredicted RBP17.34■□□□□ 0.37
NME3-205ENST00000563854 OR13C4Q8NGS5 318 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 DTX3LQ8TDB6 740 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 LRRC45Q96CN5 670 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 ELMO2Q96JJ3 720 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 WASH6PQ9NQA3 447 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 IMP3Q9NV31 184 aaKnown RBP17.34■□□□□ 0.37
NME3-205ENST00000563854 SMOXQ9NWM0 555 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 CRLS1Q9UJA2 301 aa17.34■□□□□ 0.37
NME3-205ENST00000563854 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
NME3-205ENST00000563854 C5orf60A6NFR6 353 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 CCL22O00626 93 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 SRP72O76094 671 aaKnown RBP17.33■□□□□ 0.36
NME3-205ENST00000563854 STK17BO94768 372 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 CRTAMO95727 393 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 C9P02748 559 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 CAPZBP47756 277 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 RBM12BQ8IXT5 1001 aaKnown RBP17.33■□□□□ 0.36
NME3-205ENST00000563854 UNC5BQ8IZJ1 945 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 SYCE1Q8N0S2 351 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 NLGN4XQ8N0W4 816 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 EXD3Q8N9H8 876 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 FAM71DQ8N9W8 422 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 NLGN4YQ8NFZ3 816 aaPredicted RBP17.33■□□□□ 0.36
NME3-205ENST00000563854 KIAA1143Q96AT1 154 aaPredicted RBP17.33■□□□□ 0.36
NME3-205ENST00000563854 DCUN1D1Q96GG9 259 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 FAM96AQ9H5X1 160 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 GPN2Q9H9Y4 310 aaPredicted RBP17.33■□□□□ 0.36
NME3-205ENST00000563854 FBXO8Q9NRD0 319 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 PILRAQ9UKJ1 303 aa17.33■□□□□ 0.36
NME3-205ENST00000563854 KIF1CO43896 1103 aaKnown RBP17.32■□□□□ 0.36
NME3-205ENST00000563854 KCNJ13O60928 360 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 ITGB2P05107 769 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 ANKRD34CP0C6C1 535 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 PPP1CAP62136 330 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 SH3BP2P78314 561 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 DMPKQ09013 629 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 NFATC3Q12968 1075 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 SEPT6Q14141 434 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 RPE65Q16518 533 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 TBR1Q16650 682 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 CACHD1Q5VU97 1274 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 DUS1LQ6P1R4 473 aaKnown RBP17.32■□□□□ 0.36
NME3-205ENST00000563854 TMEM139Q8IV31 216 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 TXLNBQ8N3L3 684 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 PPP1R2P1Q96PQ5 205 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 OR6C1Q96RD1 312 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 ZPBPQ9BS86 351 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
NME3-205ENST00000563854 SIDT1Q9NXL6 827 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms