RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 INO80DQ53TQ3 878 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 ANKRD20A2Q5SQ80 823 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ANKRD20A1Q5TYW2 823 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ANKRD20A3Q5VUR7 823 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 IZUMO3Q5VZ72 239 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 AFMIDQ63HM1 303 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RHBDF2Q6PJF5 856 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 PPP1R21Q6ZMI0 780 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 B4GALNT4Q76KP1 1039 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TMEM25Q86YD3 366 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ARHGAP12Q8IWW6 846 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 CPA6Q8N4T0 437 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 CCDC33Q8N5R6 958 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 EIF1ADQ8N9N8 165 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 SMRP1Q8NCR6 262 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 OR2W6PQ8NHA6 318 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 CASKIN2Q8WXE0 1202 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 FATE1Q969F0 183 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RTP4Q96DX8 246 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 HMCESQ96FZ2 354 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TEKT5Q96M29 485 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 OLFM3Q96PB7 478 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 MYADMQ96S97 322 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 CDX2Q99626 313 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 FEM1AQ9BSK4 669 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TRMT61BQ9BVS5 477 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 ACE2Q9BYF1 805 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 FRMD8Q9BZ67 464 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 DPH5Q9H2P9 285 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 LINC00597Q9H2U6 94 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 POMKQ9H5K3 350 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 UBE2ZQ9H832 354 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 C10orf88Q9H8K7 445 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 BRD9Q9H8M2 597 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ANKZF1Q9H8Y5 726 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 PCDH9Q9HC56 1237 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 GDF3Q9NR23 364 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RBM22Q9NW64 420 aaKnown RBP eCLIP4.66□□□□□ -1.661e-9■■□□□ 12
CDR2-203ENST00000563573 PLK2Q9NYY3 685 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 KLHL8Q9P2G9 620 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 DEC1Q9P2X7 70 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 UBA2Q9UBT2 640 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 SLC25A13Q9UJS0 675 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 VPS28Q9UK41 221 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 SLC8A2Q9UPR5 921 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 AAR2Q9Y312 384 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 MFHAS1Q9Y4C4 1052 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 WNT6Q9Y6F9 365 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 PRRC2BQ5JSZ5 2229 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 EYSQ5T1H1 3165 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 DENND4AQ7Z401 1863 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ANKRD36A6QL64 1941 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 BPTFQ12830 3046 aa4.65□□□□□ -1.66
CDR2-203ENST00000563573 CXorf51AA0A1B0GTR3 108 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 CCDC151A5D8V7 595 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ERI2A8K979 691 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 H3BQ06 376 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 J3KR12 359 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 KCNK1O00180 336 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RNF103O00237 685 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 MBTPS2O43462 519 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 TIMM44O43615 452 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PRAMEF11O60813 436 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ANXA9O76027 345 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PRAMEF12O95522 483 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NUDT3O95989 172 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ATP5BP06576 529 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 LTA4HP09960 611 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 ZSCAN5DPP0CG00 497 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 KCNA5P22460 613 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NR4A1P22736 598 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 CA4P22748 312 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PTPN3P26045 913 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 TNFRSF8P28908 595 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 GDI1P31150 447 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 HSPA9P38646 679 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 MMP13P45452 471 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RPL21P46778 160 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 LSSP48449 732 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 CARSP49589 748 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 SGSHP51688 502 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PLK1P53350 603 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ITGA8P53708 1063 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 GEMP55040 296 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ARL4CP56559 192 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ST8SIA6P61647 398 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 IFI35P80217 286 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 CDK16Q00536 496 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ECT2LQ008S8 904 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RAD51Q06609 339 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NSUN2Q08J23 767 aaKnown RBP eCLIP4.65□□□□□ -1.67
CDR2-203ENST00000563573 FCHO2Q0JRZ9 810 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 WASHC5Q12768 1159 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ZNF235Q14590 738 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 SLMAPQ14BN4 828 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 MORF4L2Q15014 288 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ELF2Q15723 593 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ITPRIPL2Q3MIP1 535 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 C19orf54Q5BKX5 351 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms