RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 XRCC1P18887 633 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-203ENST00000563226 SPINT3P49223 89 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ATP4BP51164 291 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 PHKG1Q16816 387 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 MYO1HQ8N1T3 1032 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ZNF366Q8N895 744 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ST13P5Q8NFI4 369 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-203ENST00000563226 OR56A4Q8NGH8 313 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 NSUN3Q9H649 340 aaKnown RBP18.85■□□□□ 0.61
SMPD3-203ENST00000563226 CACNA2D2Q9NY47 1150 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ZDHHC3Q9NYG2 299 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ANGPTL2Q9UKU9 493 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 TRANK1O15050 2925 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 FKBP6O75344 327 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 BAG2O95816 211 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 SNRPB2P08579 225 aaKnown RBP18.84■□□□□ 0.61
SMPD3-203ENST00000563226 VIPR2P41587 438 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 RECQLP46063 649 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-203ENST00000563226 RGS4P49798 205 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 PTPN5P54829 565 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 ERVPABLB-1P60509 514 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 LRP8Q14114 963 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 KIF19Q2TAC6 998 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 ARSIQ5FYB1 569 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 GPRIN3Q6ZVF9 776 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 ZNF557Q8N988 423 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-203ENST00000563226 OTUB2Q96DC9 234 aa18.84■□□□□ 0.61
SMPD3-203ENST00000563226 MRPL1Q9BYD6 325 aaKnown RBP18.84■□□□□ 0.61
SMPD3-203ENST00000563226 NOL11Q9H8H0 719 aaKnown RBP18.84■□□□□ 0.61
SMPD3-203ENST00000563226 C9JVG2 144 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 ZNF197O14709 1029 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 NVLO15381 856 aaKnown RBP18.83■□□□□ 0.61
SMPD3-203ENST00000563226 HGFP14210 728 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 DGKAP23743 735 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 NSG1P42857 185 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 MESP2Q0VG99 397 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 MAPRE2Q15555 327 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 LETMD1Q6P1Q0 360 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 TMC5Q6UXY8 1006 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 CDYL2Q8N8U2 506 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 PDPRQ8NCN5 879 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 SMG7Q92540 1137 aaKnown RBP18.83■□□□□ 0.61
SMPD3-203ENST00000563226 COPS8Q99627 209 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 HEPHQ9BQS7 1158 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 APOL5Q9BWW9 433 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 CERS4Q9HA82 394 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 PIDD1Q9HB75 910 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 PCDHGA7Q9Y5G6 932 aa18.83■□□□□ 0.61
SMPD3-203ENST00000563226 PLXNA2O75051 1894 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 TAPBPO15533 448 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 RB1P06400 928 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 CISD3P0C7P0 127 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 UROSP10746 265 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 LBPP18428 481 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 STX1BP61266 288 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 PCBP2Q15366 365 aaKnown RBP eCLIP18.83■□□□□ 0.6
SMPD3-203ENST00000563226 POM121L1PQ3SYA9 428 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 MMEL1Q495T6 779 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 C9orf50Q5SZB4 431 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 AAGABQ6PD74 315 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 GOLGA7Q7Z5G4 137 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 HSD11B1LQ7Z5J1 315 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 KBTBD2Q8IY47 623 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 OR2T11Q8NH01 316 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 JADE3Q92613 823 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 ZNF382Q96SR6 550 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 SERPINI1Q99574 410 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 NUSAP1Q9BXS6 441 aaKnown RBP18.83■□□□□ 0.6
SMPD3-203ENST00000563226 FAM126AQ9BYI3 521 aaPredicted RBP18.83■□□□□ 0.6
SMPD3-203ENST00000563226 SPATS2LQ9NUQ6 558 aaKnown RBP18.83■□□□□ 0.6
SMPD3-203ENST00000563226 MRGBPQ9NV56 204 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 DUS2Q9NX74 493 aaKnown RBP18.83■□□□□ 0.6
SMPD3-203ENST00000563226 FBXO10Q9UK96 956 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 OARD1Q9Y530 152 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 REV3LO60673 3130 aa18.83■□□□□ 0.6
SMPD3-203ENST00000563226 OR7A17O14581 309 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 RAD51BO15315 384 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 HSPA7P48741 367 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 PSME3P61289 254 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 NAA20P61599 178 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 MS4A2Q01362 244 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 STX5Q13190 355 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 GPM6BQ13491 265 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 MUM1Q2TAK8 710 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 XKR7Q5GH72 579 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 DET1Q7L5Y6 550 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 PLPP6Q8IY26 295 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 FAM156AQ8NDB6 213 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 SCAMP4Q969E2 229 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 ZFYVE19Q96K21 471 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 SLC2A11Q9BYW1 496 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 NDE1Q9NXR1 346 aa18.82■□□□□ 0.6
SMPD3-203ENST00000563226 IGLV3-16A0A075B6K0 115 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 PRR35P0CG20 571 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 ADH5P11766 374 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 CCR7P32248 378 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 DGKGP49619 791 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 ACADVLP49748 655 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 DIO3P55073 304 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 BRAT1Q6PJG6 821 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms