RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 GTF2H2CQ6P1K8 395 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 TEX38Q6PEX7 206 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 MEPCEQ7L2J0 689 aaKnown RBP5.4□□□□□ -1.54
LINC00557-201ENST00000563184 SFR1Q86XK3 245 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 KMT5CQ86Y97 462 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.4□□□□□ -1.54
LINC00557-201ENST00000563184 C1orf52Q8N6N3 182 aaKnown RBP5.4□□□□□ -1.54
LINC00557-201ENST00000563184 AVL9Q8NBF6 648 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 KCTD6Q8NC69 237 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 TAS1R2Q8TE23 839 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 LPGAT1Q92604 370 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 DGAT2Q96PD7 388 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 LRMDAQ9H2I8 198 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 MMP27Q9H306 513 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
LINC00557-201ENST00000563184 CRNNQ9UBG3 495 aaPredicted RBP5.4□□□□□ -1.54
LINC00557-201ENST00000563184 TRPV2Q9Y5S1 764 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 RPS6KL1Q9Y6S9 549 aa5.4□□□□□ -1.54
LINC00557-201ENST00000563184 PLSCR5A0PG75 271 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 SYNDIG1LA6NDD5 238 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 A6NL46 340 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 EIF3DO15371 548 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00557-201ENST00000563184 ZNHIT1O43257 154 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 PPP5CP53041 499 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 SIRPAP78324 504 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 ILF3Q12906 894 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00557-201ENST00000563184 COASYQ13057 564 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 KRT33BQ14525 404 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 STXBP5Q5T5C0 1151 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 ALS2CLQ60I27 953 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 FAM109BQ6ICB4 259 aaPredicted RBP5.39□□□□□ -1.55
LINC00557-201ENST00000563184 OR7E24Q6IFN5 339 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 GAGE2AQ6NT46 116 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF704Q6ZNC4 412 aaPredicted RBP5.39□□□□□ -1.55
LINC00557-201ENST00000563184 PLPPR4Q7Z2D5 763 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 PHF21AQ96BD5 680 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 IL17FQ96PD4 163 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 SEMA6AQ9H2E6 1030 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 CHMP1AQ9HD42 196 aaPredicted RBP5.39□□□□□ -1.55
LINC00557-201ENST00000563184 GDE1Q9NZC3 331 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 PCDHGB1Q9Y5G3 927 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF541Q9H0D2 1346 aa5.39□□□□□ -1.55
LINC00557-201ENST00000563184 CTAGE9A4FU28 777 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 PRAC2D3DTV9 90 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 CLGNO14967 610 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TO15178 435 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 SLC16A5O15375 505 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 WDR1O75083 606 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 PSMD10O75832 226 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 CTAGE8P0CG41 777 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 FGF3P11487 239 aaPredicted RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 ITGB6P18564 788 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 LIG4P49917 911 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 PLIN5Q00G26 463 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 EEF1A2Q05639 463 aaKnown RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 CALD1Q05682 793 aaKnown RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TROAPQ12815 778 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 IL11RAQ14626 422 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 MELKQ14680 651 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 RASA2Q15283 850 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TMEM266Q2M3C6 531 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 ERMARDQ5T6L9 678 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 UNQ6126/PRO20091Q6UXV3 157 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TUBA1AQ71U36 451 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 CTAGE4Q8IX94 777 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 POGLUT1Q8NBL1 392 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 RBM15BQ8NDT2 890 aaKnown RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 MCUQ8NE86 351 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 WDR20Q8TBZ3 569 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TMEM255BQ8WV15 326 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 ERLEC1Q96DZ1 483 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 IGSF21Q96ID5 467 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TUBA1CQ9BQE3 449 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 SLA2Q9H6Q3 261 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 SLC35C2Q9NQQ7 365 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 TCP11L1Q9NUJ3 509 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 NFKBIL1Q9UBC1 381 aaPredicted RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 ANAPC2Q9UJX6 822 aa5.38□□□□□ -1.55
LINC00557-201ENST00000563184 PPIEQ9UNP9 301 aaKnown RBP5.38□□□□□ -1.55
LINC00557-201ENST00000563184 GCNT3O95395 438 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 ABCB1P08183 1280 aaPredicted RBP5.37□□□□□ -1.55
LINC00557-201ENST00000563184 GM2AP17900 193 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 ARCN1P48444 511 aaKnown RBP5.37□□□□□ -1.55
LINC00557-201ENST00000563184 LMAN1P49257 510 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 AMPHP49418 695 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 IZUMO4Q1ZYL8 232 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 TMEM211Q6ICI0 200 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 FBXO39Q8N4B4 442 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 GBGT1Q8N5D6 347 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 CCDC191Q8NCU4 936 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 SPATA20Q8TB22 786 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 PTERQ96BW5 349 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 FAM84BQ96KN1 310 aaPredicted RBP5.37□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF582Q96NG8 517 aaPredicted RBP5.37□□□□□ -1.55
LINC00557-201ENST00000563184 NEURL2Q9BR09 285 aa5.37□□□□□ -1.55
LINC00557-201ENST00000563184 C16orf70Q9BSU1 422 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms