RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 KRT86O43790 486 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 SRP72O76094 671 aaKnown RBP16.54■□□□□ 0.24
CLK3-210ENST00000563112 RALBP11234 206 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 BRAFP15056 766 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 TYRP1P17643 537 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 HADHAP40939 763 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 CTSCP53634 463 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 DMPKQ09013 629 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 OLIG2Q13516 323 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 SPARCL1Q14515 664 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 P3H1Q32P28 736 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 FNBP1LQ5T0N5 605 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 CEACAM20Q6UY09 585 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 ULK4Q96C45 1275 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 DCUN1D1Q96GG9 259 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 HES6Q96HZ4 224 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 C19orf43Q9BQ61 176 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 ZPBPQ9BS86 351 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 ARNT2Q9HBZ2 717 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 SLC40A1Q9NP59 571 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 CRLS1Q9UJA2 301 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 KCTD3Q9Y597 815 aa16.54■□□□□ 0.24
CLK3-210ENST00000563112 MN1Q10571 1320 aaPredicted RBP16.53■□□□□ 0.24
CLK3-210ENST00000563112 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 KLHL33A6NCF5 533 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 OR52A4PA6NMU1 304 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 ITGALP20701 1170 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 MC2RQ01718 297 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 KLF1Q13351 362 aaPredicted RBP16.53■□□□□ 0.24
CLK3-210ENST00000563112 KIAA1614Q5VZ46 1190 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 ANKS6Q68DC2 871 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 VASH2Q86V25 355 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 BEND7Q8N7W2 519 aaPredicted RBP16.53■□□□□ 0.24
CLK3-210ENST00000563112 HEXDCQ8WVB3 486 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 SGF29Q96ES7 293 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 LRRC40Q9H9A6 602 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 FBXO8Q9NRD0 319 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 SLC30A1Q9Y6M5 507 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 CFAP46Q8IYW2 2715 aa16.53■□□□□ 0.24
CLK3-210ENST00000563112 MGAT4DA6NG13 374 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 CFAP99D6REC4 459 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 TOX3O15405 576 aaPredicted RBP16.52■□□□□ 0.24
CLK3-210ENST00000563112 C9P02748 559 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 ANKRD34CP0C6C1 535 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 PBLDP30039 288 aaPredicted RBP16.52■□□□□ 0.24
CLK3-210ENST00000563112 CA5AP35218 305 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 TMPRSS15P98073 1019 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 GPR18Q14330 331 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 CLCA4Q14CN2 919 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 DENND5AQ6IQ26 1287 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 KLHL35Q6PF15 583 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 DET1Q7L5Y6 550 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 KLHDC8BQ8IXV7 354 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 IL22RA1Q8N6P7 574 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 BMPERQ8N8U9 685 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 OR13C4Q8NGS5 318 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 SLC35B2Q8TB61 432 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 JPH3Q8WXH2 748 aaPredicted RBP16.52■□□□□ 0.24
CLK3-210ENST00000563112 TTC9Q92623 222 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 NKD1Q969G9 470 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 PMEPA1Q969W9 287 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 C9orf72Q96LT7 481 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 TGM7Q96PF1 710 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 TMEM121Q9BTD3 319 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 ACSL5Q9ULC5 683 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 WDR37Q9Y2I8 494 aa16.52■□□□□ 0.24
CLK3-210ENST00000563112 R3HDM2Q9Y2K5 976 aaKnown RBP16.52■□□□□ 0.24
CLK3-210ENST00000563112 SMG1Q96Q15 3661 aaKnown RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 SDK2Q58EX2 2172 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 CAPN5O15484 640 aaPredicted RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 METTL18O95568 372 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 PRB1P04280 392 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 STIP1P31948 543 aaKnown RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 ZNF140P52738 457 aaPredicted RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 GFERP55789 205 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 XIAPP98170 497 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 NFE2L1Q14494 772 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 RPE65Q16518 533 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 GPR33Q49SQ1 333 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 METRNLQ641Q3 311 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 PCSK4Q6UW60 755 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 SNX20Q7Z614 316 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 CACNA2D3Q8IZS8 1091 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 ZDHHC12Q96GR4 267 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 COPS8Q99627 209 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 CTRCQ99895 268 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 FRMD8P1Q9BZ68 369 aaPredicted RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 OGFRQ9NZT2 677 aa16.51■□□□□ 0.23
CLK3-210ENST00000563112 GCN1Q92616 2671 aaKnown RBP16.51■□□□□ 0.23
CLK3-210ENST00000563112 TCRBV7S2A1N4TA0A589 114 aa16.5■□□□□ 0.23
CLK3-210ENST00000563112 AGAP14A8MT82 685 aa16.5■□□□□ 0.23
CLK3-210ENST00000563112 POLR1CO15160 346 aaPredicted RBP16.5■□□□□ 0.23
CLK3-210ENST00000563112 ARHGAP6O43182 974 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms