RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ABRQ12979 859 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ATP1A4Q13733 1029 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 PTPRCAPQ14761 206 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 PAFAH1B3Q15102 231 aaKnown RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 LLGL1Q15334 1064 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 NFKBIBQ15653 356 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 CHRNA6Q15825 494 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 IFI16Q16666 785 aaKnown RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ALG1LQ6GMV1 187 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 MAMDC2Q7Z304 686 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 C11orf96Q7Z7L8 435 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 NT5DC3Q86UY8 548 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 NLRP8Q86W28 1048 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 PQLC3Q8N755 202 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 TEKT4Q8WW24 435 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ZNF514Q96K75 400 aaPredicted RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 RANBP9Q96S59 729 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UCK1Q9HA47 277 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A7Q9HAW7 530 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A10Q9HAW8 530 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 UGT1A8Q9HAW9 530 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 MRPL47Q9HD33 250 aaKnown RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 POT1Q9NUX5 634 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 ASF1BQ9NVP2 202 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 SNX7Q9UNH6 387 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 FARSAQ9Y285 508 aaKnown RBP11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 SEC16AO15027 2179 aa11.43□□□□□ -0.58
NSMCE1-202ENST00000561960 OR6C74A6NCV1 312 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 ENO4A6NNW6 628 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 C21orf140B9A014 251 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM63AO94886 807 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 CCNCP24863 283 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 OTX2P32243 289 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 DYNLT1P63172 113 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 PIGHQ14442 188 aaPredicted RBP11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 SLC9A5Q14940 896 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 RPE65Q16518 533 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 STX1AQ16623 288 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 HGSNATQ68CP4 663 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 TIGD7Q6NT04 549 aaPredicted RBP11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 FAM151BQ6UXP7 276 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 SYVN1Q86TM6 617 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 SLC25A41Q8N5S1 370 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 TRAM1L1Q8N609 369 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 RASGEF1AQ8N9B8 481 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 SLC41A2Q96JW4 573 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 TRIB3Q96RU7 358 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 LYSMD1Q96S90 227 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 ZSCAN5AQ9BUG6 496 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 WWP1Q9H0M0 922 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 ISCUQ9H1K1 167 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 DEF6Q9H4E7 631 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 DNPEPQ9ULA0 475 aa11.42□□□□□ -0.58
NSMCE1-202ENST00000561960 ANKRD12Q6UB98 2062 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ARHGAP10A1A4S6 786 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 TOX3O15405 576 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 CPNE3O75131 537 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ALOX12BO75342 701 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 LDLRP01130 860 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 MT-ND3P03897 115 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 GZMAP12544 262 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 TNNT1P13805 278 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 PVRP15151 417 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 POLR2CP19387 275 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 FECHP22830 423 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 CHRNA4P43681 627 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 KPNA2P52292 529 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 PDE1BQ01064 536 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM115Q12893 351 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 XRCC4Q13426 336 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 CT47A1Q5JQC4 288 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ABRAXAS1Q6UWZ7 409 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 DAAM2Q86T65 1068 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ZBTB2Q8N680 514 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 LILRA3Q8N6C8 439 aaPredicted RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 CPLX3Q8WVH0 158 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 RAPGEF5Q92565 580 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 SNRNP40Q96DI7 357 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 TIMM29Q9BSF4 260 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ADGRE3Q9BY15 652 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 WASH6PQ9NQA3 447 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 ANO10Q9NW15 660 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 HRASLS2Q9NWW9 162 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 PDZD2O15018 2839 aa11.41□□□□□ -0.58
NSMCE1-202ENST00000561960 A0A087X0T9 212 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 SLC9B1P1A6NJY1 282 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM150CB9EJG8 249 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 POP7O75817 140 aaKnown RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 POLBP06746 335 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 FAM228BP0C875 321 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 MYBL1P10243 752 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms