RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 INSIG1O15503 277 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 BUB1O43683 1085 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 KIF1CO43896 1103 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 STX10O60499 249 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SNX2O60749 519 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 UBXN7O94888 489 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SLITRK5O94991 958 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 EML2O95834 649 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 RAB40ALP0C0E4 278 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 FOLR1P15328 257 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 NELFEP18615 380 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 NR2F2P24468 414 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 TBXAS1P24557 533 aaPredicted RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 PCSK6P29122 969 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PSMC2P35998 433 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 CA7P43166 264 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 GPD2P43304 727 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 ARCN1P48444 511 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 RPL34P49207 117 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 ADORA2A-AS1P86434 159 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 CDK3Q00526 305 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 LRMPQ12912 555 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 GPS2Q13227 327 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SLBPQ14493 270 aaKnown RBP eCLIP5.21□□□□□ -1.58
HERC1-213ENST00000561359 KCNAB1Q14722 419 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 ZNF169Q14929 603 aaPredicted RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 CDSNQ15517 529 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 NKG7Q16617 165 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 TSNAXIP1Q2TAA8 658 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 BRMS1LQ5PSV4 323 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SFRP5Q5T4F7 317 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 CDKAL1Q5VV42 579 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PRAMEF13Q5VWM6 474 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PLEKHA7Q6IQ23 1121 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 LETMD1Q6P1Q0 360 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 BRAT1Q6PJG6 821 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 DNAJC14Q6Y2X3 702 aaPredicted RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 FAM92BQ6ZTR7 304 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 MARK2Q7KZI7 788 aaKnown RBP5.21□□□□□ -1.58
HERC1-213ENST00000561359 FAM214BQ7L5A3 538 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PRSS42Q7Z5A4 293 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 GALNT13Q8IUC8 556 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 TMEM126BQ8IUX1 230 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 HCAR2Q8TDS4 363 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PPP4R1Q8TF05 950 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 NUS1Q96E22 293 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 ARSGQ96EG1 525 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 EXOC2Q96KP1 924 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 GBP5Q96PP8 586 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SLC2A13Q96QE2 648 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 TEX101Q9BY14 249 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 NLNQ9BYT8 704 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 ZYG11BQ9C0D3 744 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 ANLNQ9NQW6 1124 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 PIGVQ9NUD9 493 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SLC17A4Q9Y2C5 497 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 TMEM98Q9Y2Y6 226 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 MFHAS1Q9Y4C4 1052 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 VPS13CQ709C8 3753 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 SEC16AO15027 2179 aa5.21□□□□□ -1.58
HERC1-213ENST00000561359 LILRA5A6NI73 299 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RNF212BA8MTL3 300 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 I6L893 689 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 HSF2BPO75031 334 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 SCRG1O75711 98 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 UNC5CO95185 931 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 BPNT1O95861 308 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 CBX7O95931 251 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 IGHEP01854 428 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 PGRP06401 933 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RNASE1P07998 156 aaKnown RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 GLI1P08151 1106 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 INHBBP09529 407 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 SLC2A4P14672 509 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 GM2AP17900 193 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TFE3P19532 575 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 CXCR3P49682 368 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 CLCN7P51798 805 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 GSDMDP57764 484 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ADAM8P78325 824 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ACY1Q03154 408 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RBPJQ06330 500 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ENPEPQ07075 957 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RALGDSQ12967 914 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 STK4Q13043 487 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 GRM3Q14832 879 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 PRKD1Q15139 912 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 NKPD1Q17RQ9 610 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 PYCR3Q53H96 274 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TCERG1LQ5VWI1 586 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 B3GNTL1Q67FW5 361 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 DENND2CQ68D51 928 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RAET1GQ6H3X3 334 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 LCN10Q6JVE6 187 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 RWDD4Q6NW29 188 aaKnown RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 IRGCQ6NXR0 463 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms