RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM107AO95990 144 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 SOD1P00441 154 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PCCBP05166 539 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ITGB6P18564 788 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ACSL1P33121 698 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 TRIM23P36406 574 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 GMPRP36959 345 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 MAGEA9P43362 315 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 MAPK9P45984 424 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 CCR3P51677 355 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 SEC24CP53992 1094 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PLOD1Q02809 727 aaPredicted RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 DLG1Q12959 904 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 INPP5AQ14642 412 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 TECRLQ5HYJ1 363 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ANO7Q6IWH7 933 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 TMEM220Q6QAJ8 160 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 RAB44Q7Z6P3 723 aaPredicted RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 HEATR4Q86WZ0 1026 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 C10orf107Q8IVU9 208 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 CPNE9Q8IYJ1 553 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 CAMKK1Q8N5S9 505 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 RASGEF1AQ8N9B8 481 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PLA2G15Q8NCC3 412 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 DENND6BQ8NEG7 585 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PJA1Q8NG27 643 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 BCAS4Q8TDM0 211 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PPP4R1Q8TF05 950 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ELMO1Q92556 727 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 KLK6Q92876 244 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 LINGO1Q96FE5 620 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ZNF317Q96PQ6 595 aaPredicted RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 CCT8L2Q96SF2 557 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 TEX101Q9BY14 249 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 FAM126AQ9BYI3 521 aaPredicted RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 TRIM54Q9BYV2 358 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 OR2AG1Q9H205 316 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 CHRDQ9H2X0 955 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 WDR26Q9H7D7 661 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 OXSMQ9NWU1 459 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 GALPQ9UBC7 116 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 EBF1Q9UH73 591 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 DNMT3AQ9Y6K1 912 aaPredicted RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 NCOR1O75376 2440 aa10.15□□□□□ -0.79
USP3-219ENST00000561326 C17orf113A0A1B0GUU1 675 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 OR2AG2A6NM03 316 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TARM1B6A8C7 271 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 G3V2L1 256 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CACNB4O00305 520 aaPredicted RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 BTN3A1O00481 513 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 NDUFAB1O14561 156 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TOR1BO14657 336 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 FPGTO14772 594 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 SLC31A1O15431 190 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 IPO13O94829 963 aaKnown RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 S100BP04271 92 aaPredicted RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 SERPINE1P05121 402 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 HOXC4P09017 264 aaPredicted RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 BGNP21810 368 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 KCNA4P22459 653 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 HNRNPA2B1P22626 353 aaKnown RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 KELP23276 732 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CD6P30203 668 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 MAT2AP31153 395 aaKnown RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 CCR7P32248 378 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CXCL12P48061 93 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 PRLHRP49683 370 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CCR5P51681 352 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 DNAJB13P59910 316 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 NAA20P61599 178 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 ZXDAP98168 799 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CDK3Q00526 305 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 HSPA14Q0VDF9 509 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 PCLAFQ15004 111 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 IRF4Q15306 451 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 BCL7AQ4VC05 210 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 SYTL3Q4VX76 610 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CFAP157Q5JU67 520 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 LIPMQ5VYY2 423 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 ADGRG6Q86SQ4 1221 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 ADAMTSL2Q86TH1 951 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 GPSM1Q86YR5 675 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TRAPPC5Q8IUR0 188 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 LRRC34Q8IZ02 419 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TP53I13Q8NBR0 393 aaPredicted RBP10.14□□□□□ -0.79
USP3-219ENST00000561326 TMEM159Q96B96 161 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 COX14Q96I36 57 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 SLC30A3Q99726 388 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 MECRQ9BV79 373 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 FAM107BQ9H098 131 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 THAP1Q9NVV9 213 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 ATXN10Q9UBB4 475 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 XPR1Q9UBH6 696 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 MUTYHQ9UIF7 546 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 DMTF1Q9Y222 760 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 TDRD6O60522 2096 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms