RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 B4E171 279 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 CRTAMO95727 393 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 XRCC1P18887 633 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 TSPAN7P41732 249 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 PPM1FP49593 454 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 MANEAQ5SRI9 462 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 MEI1Q5TIA1 1274 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 ABRAXAS1Q6UWZ7 409 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 XKR5Q6UX68 686 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 RANBP10Q6VN20 620 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 FAM83HQ6ZRV2 1179 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 TMEM26Q6ZUK4 368 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 KLHDC8BQ8IXV7 354 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 AVL9Q8NBF6 648 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 GPR150Q8NGU9 434 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 GDAP1Q8TB36 358 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 SH3KBP1Q96B97 665 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 WBP1Q96G27 269 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 DDA1Q9BW61 102 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 ZCCHC2Q9C0B9 1178 aaKnown RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 UCK1Q9HA47 277 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 APMAPQ9HDC9 416 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 SMOXQ9NWM0 555 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 SIDT1Q9NXL6 827 aaKnown RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 STMND1H3BQB6 276 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 STX7O15400 261 aaKnown RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 TYRP1P17643 537 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 LAMB3Q13751 1172 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 GTF2H3Q13889 308 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 CLCA4Q14CN2 919 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 TMEM164Q5U3C3 297 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 AGAP9Q5VTM2 703 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 DENND5AQ6IQ26 1287 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 C4orf22Q6V702 233 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 RSC1A1Q92681 617 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 NKD1Q969G9 470 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 CTRCQ99895 268 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 C19orf43Q9BQ61 176 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-204ENST00000561065 SLC39A1Q9NY26 324 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 FKBPLQ9UIM3 349 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 ZNF148Q9UQR1 794 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 ZKSCAN5Q9Y2L8 839 aa15.68■□□□□ 0.1
LMX1B-204ENST00000561065 OR2AG2A6NM03 316 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 ERI2A8K979 691 aaKnown RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 PRAMEF1O95521 474 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 VIPP01282 170 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 C9P02748 559 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 VCLP18206 1134 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 LPOP22079 712 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 XIAPP98170 497 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 DMPKQ09013 629 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 C19orf57Q0VDD7 668 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 KLF1Q13351 362 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 ITGA9Q13797 1035 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 GPR18Q14330 331 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 LINC00303Q3SY05 128 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 LDLRAP1Q5SW96 308 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 WASH2PQ6VEQ5 465 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 SLC13A5Q86YT5 568 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 TRIM48Q8IWZ4 208 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 BEND7Q8N7W2 519 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 FAM71DQ8N9W8 422 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 OR4K2Q8NGD2 314 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 OR13C4Q8NGS5 318 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 RTP4Q96DX8 246 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 SGF29Q96ES7 293 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 SPRY4Q9C004 299 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 EPB41L1Q9H4G0 881 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 WASH6PQ9NQA3 447 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 POT1Q9NUX5 634 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 R3HDM2Q9Y2K5 976 aaKnown RBP15.67■□□□□ 0.1
LMX1B-204ENST00000561065 PPP2R2CQ9Y2T4 447 aa15.67■□□□□ 0.1
LMX1B-204ENST00000561065 SPENQ96T58 3664 aaKnown RBP15.66■□□□□ 0.1
LMX1B-204ENST00000561065 TCRBV7S2A1N4TA0A589 114 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 SGTAO43765 313 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 KCNJ13O60928 360 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 UBXN7O94888 489 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 ANKRD34CP0C6C1 535 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 HADHAP40939 763 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 CAPZBP47756 277 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 LEPRP48357 1165 aaKnown RBP15.66■□□□□ 0.1
LMX1B-204ENST00000561065 LMAN1P49257 510 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 ZNF140P52738 457 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-204ENST00000561065 GDF10P55107 478 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 RAB15P59190 212 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 PPP1CAP62136 330 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 CYP4F2P78329 520 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 MC2RQ01718 297 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 NFE2L1Q14494 772 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 SPARCL1Q14515 664 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 TAF1AQ15573 450 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-204ENST00000561065 CCDC89Q8N998 374 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 SLC35B2Q8TB61 432 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 RNF31Q96EP0 1072 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 TBL1YQ9BQ87 522 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 LRRC40Q9H9A6 602 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 SLC40A1Q9NP59 571 aa15.66■□□□□ 0.1
LMX1B-204ENST00000561065 E7EVH7 732 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms