RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CCDC38Q502W7 563 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 TAB3Q8N5C8 712 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-225ENST00000560005 TEX26Q8N6G2 289 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 ZIM3Q96PE6 472 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 ROPN1BQ9BZX4 212 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-225ENST00000560005 LRRC40Q9H9A6 602 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 PPCSQ9HAB8 311 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 ROPN1Q9HAT0 212 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-225ENST00000560005 GLOD4Q9HC38 313 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 CREBBPQ92793 2442 aa20.32■□□□□ 0.84
PSEN1-225ENST00000560005 RHPN2P1A8MT19 583 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 GOLGA8MH3BSY2 632 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 NKX2-8O15522 239 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 RAD1O60671 282 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 SUN1O94901 812 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 AP2A1O95782 977 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 PRKCGP05129 697 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 IVLP07476 585 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 PRKAR1AP10644 381 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 SLC29A2Q14542 456 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 ARMC3Q5W041 872 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 ERAP2Q6P179 960 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 LRRC8BQ6P9F7 803 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 ARHGAP36Q6ZRI8 547 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 ZNF438Q7Z4V0 828 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 PALM2Q8IXS6 379 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 KLHDC8BQ8IXV7 354 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 ZBED8Q8IZ13 594 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 KRT222Q8N1A0 295 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 SERPINB12Q96P63 405 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 NAT9Q9BTE0 207 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 TMEM109Q9BVC6 243 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 CYP4F12Q9HCS2 524 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 FAM53CQ9NYF3 392 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 MOSPD1Q9UJG1 213 aa20.31■□□□□ 0.84
PSEN1-225ENST00000560005 A0A087WUV0 522 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-225ENST00000560005 TCRBV7S3A2A0A539 114 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 NFKB1P19838 968 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 KELP23276 732 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 MMP12P39900 470 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 MMP13P45452 471 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 KYNUQ16719 465 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 BBS9Q3SYG4 887 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 INO80DQ53TQ3 878 aaPredicted RBP20.3■□□□□ 0.84
PSEN1-225ENST00000560005 CNPY4Q8N129 248 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 MIB2Q96AX9 1013 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 DDA1Q9BW61 102 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 SLC25A51Q9H1U9 297 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 SUV39H2Q9H5I1 410 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 SPATS2LQ9NUQ6 558 aaKnown RBP20.3■□□□□ 0.84
PSEN1-225ENST00000560005 NINJ2Q9NZG7 142 aa20.3■□□□□ 0.84
PSEN1-225ENST00000560005 TSPAN11A1L157 253 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 SDR42E2A6NKP2 422 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 GOLGA8KD6RF30 607 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 TNFRSF10CO14798 259 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 DUX1O43812 170 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 CD1CP29017 333 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 CD68P34810 354 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 LIMK2P53671 638 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 MPP3Q13368 585 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 LBRQ14739 615 aaKnown RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 NR1D2Q14995 579 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 CLPPQ16740 277 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 FNBP1LQ5T0N5 605 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 C17orf82Q86X59 251 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 CNTD1Q8N815 330 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 AGBL5Q8NDL9 886 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 HCAR2Q8TDS4 363 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 ZDHHC1Q8WTX9 485 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 ABHD17AQ96GS6 310 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 SLC45A3Q96JT2 553 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 LGR4Q9BXB1 951 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 SUDS3Q9H7L9 328 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 SLC39A1Q9NY26 324 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 LHX3Q9UBR4 397 aa20.29■□□□□ 0.84
PSEN1-225ENST00000560005 UBA2Q9UBT2 640 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-225ENST00000560005 MAGEB16A2A368 324 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 J3KR12 359 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 CAPN5O15484 640 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 RECQL5O94762 991 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 PEX11BO96011 259 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 MYZAPP0CAP1 466 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 MPSTP25325 297 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 CSTF2P33240 577 aaKnown RBP eCLIP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 MAGEA3P43357 314 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 NPY2RP49146 381 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 TRA2AQ13595 282 aaKnown RBP eCLIP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 ZNF235Q14590 738 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 SLC14A2Q15849 920 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 CEP85LQ5SZL2 805 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 NKAIN2Q5VXU1 208 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 KCTD11Q693B1 232 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 CAND1Q86VP6 1230 aaKnown RBP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 ATCAYQ86WG3 371 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 ZSWIM9Q86XI8 627 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 C9orf72Q96LT7 481 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 SH3GL2Q99962 352 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 ASPSCR1Q9BZE9 553 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 STMN4Q9H169 189 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms