RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SUV39H2Q9H5I1 410 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 PPIL1Q9Y3C6 166 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 FIS1Q9Y3D6 152 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 A0A0U1RQS6 177 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 LOC100653049A0A140TA62 436 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 FAM170BA6NMN3 283 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 SKAP2O75563 359 aaPredicted RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 KRT34O76011 436 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 FGF4P08620 206 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 SLC25A3Q00325 362 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 TSNQ15631 228 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 GPR33Q49SQ1 333 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ACCSLQ4AC99 568 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 WLSQ5T9L3 541 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 USP45Q70EL2 814 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 SERPINA9Q86WD7 417 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 CHPFQ8IZ52 775 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ZNF687Q8N1G0 1237 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 STMN2Q93045 179 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ECHDC3Q96DC8 303 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 LINGO1Q96FE5 620 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ZNF641Q96N77 438 aaPredicted RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 ACOX2Q99424 681 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ASB8Q9H765 288 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 EBF2Q9HAK2 575 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 THAP10Q9P2Z0 257 aaPredicted RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 GALPQ9UBC7 116 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 GNPTGQ9UJJ9 305 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 DHRS7Q9Y394 339 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 GLYATL1P3A0A0U1RQE8 302 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 BTN3A1O00481 513 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 KLK8O60259 260 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 CLDN7O95471 211 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 CHRNB1P11230 501 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 NFATC2Q13469 925 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 CYLC2Q14093 348 aaPredicted RBP17.56■□□□□ 0.4
SNX1-208ENST00000559844 ANKS6Q68DC2 871 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 PTRHD1Q6GMV3 140 aaKnown RBP17.56■□□□□ 0.4
SNX1-208ENST00000559844 SERPINA13PQ6UXR4 307 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 RPS27LQ71UM5 84 aaKnown RBP17.56■□□□□ 0.4
SNX1-208ENST00000559844 PLPP6Q8IY26 295 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 PELI3Q8N2H9 469 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 ZNF366Q8N895 744 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 FUBP1Q96AE4 644 aaKnown RBP17.56■□□□□ 0.4
SNX1-208ENST00000559844 SCRN2Q96FV2 425 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 PDLIM5Q96HC4 596 aaKnown RBP17.56■□□□□ 0.4
SNX1-208ENST00000559844 NELL2Q99435 816 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 SLC30A3Q99726 388 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 CACNA2D2Q9NY47 1150 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 CKAP5Q14008 2032 aa17.56■□□□□ 0.4
SNX1-208ENST00000559844 TRBV5-4A0A0C4DH59 114 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 NPEPPSL1A6NEC2 478 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 WASH3PC4AMC7 463 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CDC7O00311 574 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 GAPDHSO14556 408 aaPredicted RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 UBFD1O14562 309 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 TSPAN12O95859 305 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 BPIP17213 487 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 IL12RB1P42701 662 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CCNHP51946 323 aaPredicted RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 LRRC32Q14392 662 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 KHDC1Q4VXA5 237 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 ACSBG2Q5FVE4 666 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 SWT1Q5T5J6 900 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 ZDHHC20Q5W0Z9 365 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CHSY3Q70JA7 882 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 WDR60Q8WVS4 1066 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 C1QTNF3Q9BXJ4 246 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 LMAN1LQ9HAT1 526 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 NDE1Q9NXR1 346 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 G3BP2Q9UN86 482 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 ZNF106Q9H2Y7 1883 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 A0A088AWK7 358 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 TTC34A8MYJ7 566 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CHRM1P11229 460 aaPredicted RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 ITGAXP20702 1163 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 ACRV1P26436 265 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 EEF1DP29692 281 aaKnown RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 WASP42768 502 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CLCN7P51798 805 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 ICE2Q659A1 982 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 C16orf89Q6UX73 402 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 Q6ZS52 159 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 SNX32Q86XE0 403 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 PJA1Q8NG27 643 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 GIMAP7Q8NHV1 300 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 RPLP0P6Q8NHW5 317 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 KCNV2Q8TDN2 545 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 EEF1AKMT1Q8WVE0 214 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 TNFRSF12AQ9NP84 129 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 IL26Q9NPH9 171 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 NKX1-2Q9UD57 310 aaPredicted RBP17.55■□□□□ 0.4
SNX1-208ENST00000559844 SLC7A8Q9UHI5 535 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 CRLS1Q9UJA2 301 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 IKZF3Q9UKT9 509 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 SLC8A2Q9UPR5 921 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 COPG1Q9Y678 874 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms