RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 DTWD1Q8N5C7 304 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 SLC25A41Q8N5S1 370 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 GPR156Q8NFN8 814 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 IPMKQ8NFU5 416 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 OR6P1Q8NGX9 317 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 MAPK15Q8TD08 544 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 CCHCR1Q8TD31 782 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 NAT6Q93015 286 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 HIC2Q96JB3 615 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 OR2M4Q96R27 311 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 CCDC3Q9BQI4 270 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 GPR63Q9BZJ6 419 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 TSGA10Q9BZW7 698 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 FAM83DQ9H4H8 585 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 SPATS2LQ9NUQ6 558 aaKnown RBP5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 TRNAU1APQ9NX07 287 aaKnown RBP5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 KLHL3Q9UH77 587 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 CLCA2Q9UQC9 943 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 PLEKHM1Q9Y4G2 1056 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 PCDHB1Q9Y5F3 818 aa5.96□□□□□ -1.45
CTDSPL2-204ENST00000558966 ZNF106Q9H2Y7 1883 aaKnown RBP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 PTPRQQ9UMZ3 2332 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 SRRM3A6NNA2 597 aaPredicted RBP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 DNAJC6O75061 913 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ATP1A1P05023 1023 aaKnown RBP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 HLA-DPA1P20036 260 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ADRA1AP35348 466 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 GEMP55040 296 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 CYP4F3Q08477 520 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ILF3Q12906 894 aaKnown RBP eCLIP5.96□□□□□ -1.467e-6■□□□□ 9.5
CTDSPL2-204ENST00000558966 HLTFQ14527 1009 aaKnown RBP eCLIP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 PYCR3Q53H96 274 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 EXOSC6Q5RKV6 272 aaKnown RBP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 CERCAMQ5T4B2 595 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ITPRIPL1Q6GPH6 555 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 DARS2Q6PI48 645 aaKnown RBP5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC30A9Q6PML9 568 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF662Q6ZS27 426 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 PROSER1Q86XN7 944 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 KLHDC8BQ8IXV7 354 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 FAM46DQ8NEK8 389 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC35B2Q8TB61 432 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC110Q8TBZ0 833 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 PATE1Q8WXA2 126 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 SPATA13Q96N96 652 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 DEPDC7Q96QD5 511 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 FICDQ9BVA6 458 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 GSDMCQ9BYG8 508 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 CDH19Q9H159 772 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 DPEP2Q9H4A9 486 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 ARFGAP3Q9NP61 516 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 LZTFL1Q9NQ48 299 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 IL17CQ9P0M4 197 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 TAAR2Q9P1P5 351 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 VPS18Q9P253 973 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 DKK4Q9UBT3 224 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMPRSS11EQ9UL52 423 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRKAB1Q9Y478 270 aa5.96□□□□□ -1.46
CTDSPL2-204ENST00000558966 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 GOLGA6L9A6NEM1 432 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 C5orf60A6NFR6 353 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 NTN3O00634 580 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 GAPDHSO14556 408 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMPRSS2O15393 492 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 GPR39O43194 453 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 BUD23O43709 281 aaKnown RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 CSO75390 466 aaKnown RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 KRT37O76014 449 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ANXA9O76027 345 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ASMTLO95671 621 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 AGTP01019 485 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 FGF1P05230 155 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 PGRP06401 933 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC175P0C221 793 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 HMGCLP35914 325 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 PDX1P52945 283 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 MAZP56270 477 aaKnown RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ETF1P62495 437 aaKnown RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 RAC1P63000 192 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCL7P80098 99 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ID3Q02535 119 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 RTP5Q14D33 572 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ISXQ2M1V0 245 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ATP13A5Q4VNC0 1218 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 KHDC1Q4VXA5 237 aaKnown RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 C14orf28Q4W4Y0 310 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF569Q5MCW4 686 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 HP1BP3Q5SSJ5 553 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF648Q5T619 568 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC70Q6NSX1 233 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 RANBP10Q6VN20 620 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ACAD11Q709F0 780 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 GLT6D1Q7Z4J2 308 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 C17orf82Q86X59 251 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 GALNT13Q8IUC8 556 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 NAGSQ8N159 534 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 TRAM1L1Q8N609 369 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 FAM71DQ8N9W8 422 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 BLOC1S5Q8TDH9 187 aa5.95□□□□□ -1.46
CTDSPL2-204ENST00000558966 ATG4AQ8WYN0 398 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms