RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMEM173Q86WV6 379 aaPredicted RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 KCNH5Q8NCM2 988 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 PPFIBP2Q8ND30 876 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 DEPDC1BQ8WUY9 529 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 MRPS27Q92552 414 aaKnown RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 RND1Q92730 232 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 ZNF830Q96NB3 372 aaPredicted RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 SLC22A12Q96S37 553 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 SEPHS2Q99611 448 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 NAA11Q9BSU3 229 aaPredicted RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 WACQ9BTA9 647 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 MBNL1Q9NR56 388 aaKnown RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 OLAHQ9NV23 265 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 DPP3Q9NY33 737 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.32□□□□□ -1.72
CASC4-206ENST00000558847 WNT16Q9UBV4 365 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 GTF3C4Q9UKN8 822 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 INSL5Q9Y5Q6 135 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 NFS1Q9Y697 457 aa4.32□□□□□ -1.72
CASC4-206ENST00000558847 FAM90A10PA6NDY2 464 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 J3QR06 171 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 TKTP29401 623 aaKnown RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 CLDN20P56880 219 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 HYAL4Q2M3T9 481 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 LEXMQ3ZCV2 418 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 PLA2G4FQ68DD2 849 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 AWAT2Q6E213 333 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 PLEKHM3Q6ZWE6 761 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 DET1Q7L5Y6 550 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 CENPVQ7Z7K6 275 aaPredicted RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 CEP97Q8IW35 865 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 RNF113BQ8IZP6 322 aaKnown RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 FBXO39Q8N4B4 442 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 C1orf52Q8N6N3 182 aaKnown RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 PI4KAP1Q8N8J0 262 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 IQUBQ8NA54 791 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 OR2AK2Q8NG84 335 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 TBC1D16Q8TBP0 767 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 PIGTQ969N2 578 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 SLAMF9Q96A28 289 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 RHBDF1Q96CC6 855 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 GFI1Q99684 422 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 CMKLR1Q99788 373 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 CITED2Q99967 270 aaPredicted RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 GPR88Q9GZN0 384 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 WNT5BQ9H1J7 359 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 PPIL3Q9H2H8 161 aaKnown RBP4.31□□□□□ -1.72
CASC4-206ENST00000558847 HHATLQ9HCP6 504 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 EQTNQ9NQ60 294 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 SMARCAL1Q9NZC9 954 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 C1RLQ9NZP8 487 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 SLC24A2Q9UI40 661 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 SIX4Q9UIU6 781 aa4.31□□□□□ -1.72
CASC4-206ENST00000558847 SOS1Q07889 1333 aaPredicted RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 CNTNAP2Q9UHC6 1331 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 LINC01553A4QN01 128 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 URADA6NGE7 173 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 LILRA5A6NI73 299 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 TMEM189-UBE2V1I3L0A0 370 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 MED24O75448 989 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 TADA2AO75478 443 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 CREG1O75629 220 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 C22orf31O95567 290 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 SNHG28P0DPA3 235 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 GLULP15104 373 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 ZNF23P17027 643 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 ITGB8P26012 769 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 MC5RP33032 325 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 GNL1P36915 607 aaPredicted RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 TMPOP42166 694 aaKnown RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 SLC9A3P48764 834 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 CDH13P55290 713 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 SCN1BQ07699 218 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 UBE2V1Q13404 147 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 DHX34Q14147 1143 aaKnown RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 MAP7D3Q8IWC1 876 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 ZBTB8BQ8NAP8 495 aaPredicted RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 CAMKVQ8NCB2 501 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 RDM1Q8NG50 284 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 MOSPD2Q8NHP6 518 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 TAS1R2Q8TE23 839 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 MTERF3Q96E29 417 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 VMP1Q96GC9 406 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 FER1L6-AS2Q96M78 137 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 OR6C1Q96RD1 312 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 FERMT1Q9BQL6 677 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
CASC4-206ENST00000558847 SEZ6LQ9BYH1 1024 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 SPRY4Q9C004 299 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 EBF3Q9H4W6 596 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 OPA3Q9H6K4 179 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 GRPEL1Q9HAV7 217 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
CASC4-206ENST00000558847 ZNF224Q9NZL3 707 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms