RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 PLEKHA7Q6IQ23 1121 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 C1orf228Q6PIY5 440 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 KIAA1324Q6UXG2 1013 aaKnown RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 SERPINA13PQ6UXR4 307 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 B4GALNT4Q76KP1 1039 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 OVCH2Q7RTZ1 564 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 GDF7Q7Z4P5 450 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 GGNQ86UU5 652 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 NLRP14Q86W24 1093 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 PPP1R3BQ86XI6 285 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 ZNF677Q86XU0 584 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 FAM90A1Q86YD7 464 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 MMAAQ8IVH4 418 aaKnown RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 AADATQ8N5Z0 425 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 FITM2Q8N6M3 262 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 NLGN4YQ8NFZ3 816 aaPredicted RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 OR56A1Q8NGH5 318 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA1Q92805 767 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 ARRDC3Q96B67 414 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 PGAP3Q96FM1 320 aaPredicted RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 ZNF419Q96HQ0 510 aaPredicted RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 FAM81BQ96LP2 452 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 C1orf74Q96LT6 269 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 SERPINB11Q96P15 392 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 MCEEQ96PE7 176 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 SMIM14Q96QK8 99 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 DCLRE1CQ96SD1 692 aaKnown RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.31□□□□□ -1.72
SPG11-211ENST00000558561 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 SLC2A11Q9BYW1 496 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 NAT10Q9H0A0 1025 aaKnown RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 THAP2Q9H0W7 228 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 ISCUQ9H1K1 167 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 KLHL11Q9NVR0 708 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 PNPOQ9NVS9 261 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 WSB2Q9NYS7 404 aaPredicted RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 JKAMPQ9P055 326 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 BCCIPQ9P287 314 aaKnown RBP eCLIP4.31□□□□□ -1.72
SPG11-211ENST00000558561 CNOT8Q9UFF9 292 aaKnown RBP4.31□□□□□ -1.72
SPG11-211ENST00000558561 OR12D3Q9UGF7 316 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 FZD10Q9ULW2 581 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 TBC1D30Q9Y2I9 924 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 HYOU1Q9Y4L1 999 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 TRPM6Q9BX84 2022 aa4.31□□□□□ -1.72
SPG11-211ENST00000558561 IGLV3-10A0A075B6K4 115 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA6CA6NDK9 693 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA6BA6NDN3 693 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 FAM47DPA6NHR8 397 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 A6NNZ2 444 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 C4orf47A7E2U8 309 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 J3KR12 359 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 CASC3O15234 703 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 TIMM44O43615 452 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 B3GALT2O43825 422 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 CREB3O43889 395 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 RTN2O75298 545 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 TUSC2O75896 110 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 NCR1O76036 304 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 HAUS5O94927 633 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 EPN2O95208 641 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 LSM8O95777 96 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 CAVIN2O95810 425 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 LATS1O95835 1130 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 APOEP02649 317 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 AHSGP02765 367 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 WNT1P04628 370 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PRKCGP05129 697 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 RETP07949 1114 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 TPM2P07951 284 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZNF806P0C7X5 589 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA6DP0CG33 693 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 GCSHP23434 173 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 MIPP30301 263 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 SDC4P31431 198 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 SLC8A1P32418 973 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 DRD3P35462 400 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PTPN9P43378 593 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 RGRP47804 291 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 CSNK1EP49674 416 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 TAS2R38P59533 333 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZBED6P86452 979 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ECT2LQ008S8 904 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZNF33AQ06730 810 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 SEMA3BQ13214 749 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZNF177Q13360 481 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 GRM3Q14832 879 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 CYTH1Q15438 398 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZXDCQ2QGD7 858 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 HNRNPA1L2Q32P51 320 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 ACCSLQ4AC99 568 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 FILIP1LQ4L180 1135 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms