RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 LATS2Q9NRM7 1088 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 FAM207AQ9NSI2 230 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 SEPT11Q9NVA2 429 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PKD2L2Q9NZM6 624 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 CWC15Q9P013 229 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 COPG2Q9UBF2 871 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PCSK1NQ9UHG2 260 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 RPL26L1Q9UNX3 145 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 OSGIN2Q9Y236 505 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 PCYT1BQ9Y5K3 369 aaPredicted RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 UTP20O75691 2785 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 SPTBP11277 2137 aa5.08□□□□□ -1.6
SPG11-208ENST00000558155 ANKRD17O75179 2603 aaKnown RBP5.08□□□□□ -1.6
SPG11-208ENST00000558155 F8P00451 2351 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 C1orf232A0A0U1RR37 186 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TCRBV5S1A1TA0A578 114 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 FADS2P1A8MWK0 482 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 H3BRJ5 948 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CHUKO15111 745 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 VEGFDO43915 354 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 PRPSAP2O60256 369 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 MAFKO60675 156 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ZG16O60844 167 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ZBTB11O95625 1053 aaPredicted RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 PEX11BO96011 259 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CD63P08962 238 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 EDN3P14138 238 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 AGXTP21549 392 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 RPL10P27635 214 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 PTGER4P35408 488 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ARL4AP40617 200 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 HALP42357 657 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ARCN1P48444 511 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 MMP16P51512 607 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 POLR2FP61218 127 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 ADCY2Q08462 1091 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 GPS2Q13227 327 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 RAPSNQ13702 412 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 GPR18Q14330 331 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 MYBPC3Q14896 1274 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SEPT7Q16181 437 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 CA9Q16790 459 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 BOLA3Q53S33 107 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 DNTTIP2Q5QJE6 756 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 HENMT1Q5T8I9 393 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 ACAD10Q6JQN1 1059 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 PPP1R2P3Q6NXS1 205 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CRTC3Q6UUV7 619 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TMCO3Q6UWJ1 677 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 Q6ZS92 163 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 MON1BQ7L1V2 547 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TRIM46Q7Z4K8 759 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ADGRG6Q86SQ4 1221 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 GALNT16Q8N428 558 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ATPAF2Q8N5M1 289 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TEX26Q8N6G2 289 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 NPWQ8N729 165 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CLEC1AQ8NC01 280 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 COG1Q8WTW3 980 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TEKT4Q8WW24 435 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ZNF501Q96CX3 271 aaPredicted RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 LURAP1Q96LR2 239 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 AGAP3Q96P47 875 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SMIM14Q96QK8 99 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 WDR24Q96S15 920 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 LYSMD1Q96S90 227 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 DPH2Q9BQC3 489 aaPredicted RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 TIMM29Q9BSF4 260 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 DHRS4Q9BTZ2 278 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 ZSCAN5AQ9BUG6 496 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SNRNP25Q9BV90 132 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 SPATA16Q9BXB7 569 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SLC7A5P2Q9GIP4 190 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 POLR1EQ9GZS1 481 aaKnown RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 SYTL2Q9HCH5 934 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CHST11Q9NPF2 352 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 RAD18Q9NS91 495 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 PARVAQ9NVD7 372 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 HRASLS2Q9NWW9 162 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SLC23A2Q9UGH3 650 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 SERTAD3Q9UJW9 196 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CHKBQ9Y259 395 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 DNAJC16Q9Y2G8 782 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 PADI2Q9Y2J8 665 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 KLF2Q9Y5W3 355 aaPredicted RBP5.07□□□□□ -1.6
SPG11-208ENST00000558155 CROCCQ5TZA2 2017 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 CCDC88CQ9P219 2028 aa5.07□□□□□ -1.6
SPG11-208ENST00000558155 TLCD2A6NGC4 264 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 OR52A4PA6NMU1 304 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ANKRD66B4E2M5 251 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 C9J4A7 227 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 GPR37O15354 613 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 LDB2O43679 373 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CDK14O94921 469 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 PRLP01236 227 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 TPM2P07951 284 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 STSP08842 583 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 HBQ1P09105 142 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CCDC172P0C7W6 258 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms