RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 U3KQA8 63 aa25.13■■□□□ 1.61
SMAD6-202ENST00000557916 CNOT1A5YKK6 2376 aaKnown RBP25.13■■□□□ 1.61
SMAD6-202ENST00000557916 EIF3HO15372 352 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMAD6-202ENST00000557916 NOBOXO60393 691 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 NDUFS3O75489 264 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PBLDP30039 288 aaPredicted RBP25.12■■□□□ 1.61
SMAD6-202ENST00000557916 DUSP3P51452 185 aaPredicted RBP25.12■■□□□ 1.61
SMAD6-202ENST00000557916 FASTKD3Q14CZ7 662 aaKnown RBP25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PPM1JQ5JR12 505 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 UNC5AQ6ZN44 842 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 GPR156Q8NFN8 814 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 MGAT4DA6NG13 374 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PRR19A6NJB7 356 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 QSOX1O00391 747 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PFDN6O15212 129 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 OGNP20774 298 aaKnown RBP25.12■■□□□ 1.61
SMAD6-202ENST00000557916 KCNMB4Q86W47 210 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 UNC5BQ8IZJ1 945 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 NAGSQ8N159 534 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 LRRN4CLQ8ND94 238 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 TCF12Q99081 682 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PLAC1Q9HBJ0 212 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 SAYSD1Q9NPB0 183 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PRDM8Q9NQV8 689 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 PADI4Q9UM07 663 aa25.12■■□□□ 1.61
SMAD6-202ENST00000557916 KLHL33A6NCF5 533 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 EML2O95834 649 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 OR56A5P0C7T3 313 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 IDSP22304 550 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 ACP1P24666 158 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 DMPKQ09013 629 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 TYSND1Q2T9J0 566 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 C14orf28Q4W4Y0 310 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 HSP90AA5PQ58FG0 334 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 ZNF470Q6ECI4 717 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 DGLUCYQ7Z3D6 616 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 CILP2Q8IUL8 1156 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 LMNTD2Q8IXW0 634 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 OR2L2Q8NH16 312 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 CALML6Q8TD86 181 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 CCM2Q9BSQ5 444 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 FOXP3Q9BZS1 431 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 VPS37BQ9H9H4 285 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 ZDHHC18Q9NUE0 388 aa25.11■■□□□ 1.61
SMAD6-202ENST00000557916 CPED1A4D0V7 1026 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 PRMT5O14744 637 aaPredicted RBP25.1■■□□□ 1.61
SMAD6-202ENST00000557916 ACADVLP49748 655 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 NFE2L1Q14494 772 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 RNF187Q5TA31 235 aaPredicted RBP25.1■■□□□ 1.61
SMAD6-202ENST00000557916 STEAP4Q687X5 459 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 FAM83HQ6ZRV2 1179 aaPredicted RBP25.1■■□□□ 1.61
SMAD6-202ENST00000557916 CCDC25Q86WR0 208 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 PYROXD1Q8WU10 500 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 PATE1Q8WXA2 126 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 IFT81Q8WYA0 676 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 PHACTR1Q9C0D0 580 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 TOR4AQ9NXH8 423 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 FAM8A1Q9UBU6 413 aa25.1■■□□□ 1.61
SMAD6-202ENST00000557916 GOLGA4Q13439 2230 aaKnown RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 TRBV23OR9-2A0A075B6M9 112 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 C17orf113A0A1B0GUU1 675 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 EME2A4GXA9 379 aaPredicted RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 A6NCN8 305 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 PDZK1P1A8MUH7 402 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 F8W8V4 182 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 FTH1P19P0C7X4 201 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 ERVK-10P10266 1014 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 F3P13726 295 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 RPL10P27635 214 aaKnown RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 HLTFQ14527 1009 aaKnown RBP eCLIP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 SEPT7Q16181 437 aaKnown RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 CCDC157Q569K6 752 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 GUSBP11Q6P575 273 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 IYDQ6PHW0 289 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 SLCO6A1Q86UG4 719 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 DENND6AQ8IWF6 608 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 CERS2Q96G23 380 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 FAM167BQ9BTA0 163 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 FAM129AQ9BZQ8 928 aa25.09■■□□□ 1.61
SMAD6-202ENST00000557916 IARS2Q9NSE4 1012 aaKnown RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 APOBEC2Q9Y235 224 aaKnown RBP25.09■■□□□ 1.61
SMAD6-202ENST00000557916 DCHS1Q96JQ0 3298 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 ARHGEF17Q96PE2 2063 aaPredicted RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 UBA6A0AVT1 1052 aaPredicted RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 RHOXF2BP0C7M4 288 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 SLC2A4P14672 509 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 MAZP56270 477 aaKnown RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 CTBP1Q13363 440 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 LRRC6Q86X45 466 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 C17orf82Q86X59 251 aaPredicted RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 CFAP206Q8IYR0 622 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 ARL14Q8N4G2 192 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 GABPB2Q8TAK5 448 aaPredicted RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 HM13Q8TCT9 377 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 NAT6Q93015 286 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 RHOXF2Q9BQY4 288 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 P2RY12Q9H244 342 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 PPANQ9NQ55 473 aaKnown RBP25.08■■□□□ 1.61
SMAD6-202ENST00000557916 VPS9D1Q9Y2B5 631 aa25.08■■□□□ 1.61
SMAD6-202ENST00000557916 ZFC3H1O60293 1989 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms