RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 UGT1A1P22309 533 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A4P22310 534 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 AKT1P31749 480 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 STAT5AP42229 794 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 CTSCP53634 463 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 MC1RQ01726 317 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 CDC20Q12834 499 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 KCNAB2Q13303 367 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 XRCC4Q13426 336 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 MAP7Q14244 749 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 GPRC6AQ5T6X5 926 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 CACHD1Q5VU97 1274 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 KLHL35Q6PF15 583 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 TIPARPQ7Z3E1 657 aaKnown RBP14.36□□□□□ -0.11
SHMT2-235ENST00000557740 CDKL3Q8IVW4 592 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-235ENST00000557740 RASGEF1AQ8N9B8 481 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 STARD8Q92502 1023 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 KRT35Q92764 455 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 FICDQ9BVA6 458 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A7Q9HAW7 530 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A10Q9HAW8 530 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A8Q9HAW9 530 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 TFR2Q9UP52 801 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 WDR37Q9Y2I8 494 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 RPS6KL1Q9Y6S9 549 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 TENM4Q6N022 2769 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 OR2AG2A6NM03 316 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 NKX2-8O15522 239 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 POP7O75817 140 aaKnown RBP14.35□□□□□ -0.11
SHMT2-235ENST00000557740 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
SHMT2-235ENST00000557740 PRAMEF1O95521 474 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 CTNNA2P26232 953 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 RBL1P28749 1068 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 PBLDP30039 288 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-235ENST00000557740 COPS2P61201 443 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 SH3BP2P78314 561 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 KCNC4Q03721 635 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 DMPKQ09013 629 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 PLCL1Q15111 1095 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 LONRF2Q1L5Z9 754 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 CYB5D1Q6P9G0 228 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 TMEM220Q6QAJ8 160 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 C6orf15Q6UXA7 325 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-235ENST00000557740 FAM92BQ6ZTR7 304 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 RASGRP3Q8IV61 690 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 STAMBPL1Q96FJ0 436 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 OR6C1Q96RD1 312 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 IL17BQ9UHF5 180 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 TUBD1Q9UJT1 453 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 PSMD13Q9UNM6 376 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 ARL5AQ9Y689 179 aa14.35□□□□□ -0.11
SHMT2-235ENST00000557740 KIF1CO43896 1103 aaKnown RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 AGTP01019 485 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 CTNNA1P35221 906 aaKnown RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 NAP1L1P55209 391 aaKnown RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 NFE2L1Q14494 772 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 PRPSAP1Q14558 356 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 IL11RAQ14626 422 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 FNBP1LQ5T0N5 605 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 DET1Q7L5Y6 550 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 GPR150Q8NGU9 434 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 RNF31Q96EP0 1072 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 ELMO2Q96JJ3 720 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 ZNF514Q96K75 400 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 CALR3Q96L12 384 aaKnown RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 C10orf88Q9H8K7 445 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 IMP3Q9NV31 184 aaKnown RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 EPHA6Q9UF33 1036 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 LNPEPQ9UIQ6 1025 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 DNMT3AQ9Y6K1 912 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-235ENST00000557740 MYO18BQ8IUG5 2567 aa14.34□□□□□ -0.11
SHMT2-235ENST00000557740 GAPDHSO14556 408 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 PJA2O43164 708 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 SUV39H1O43463 412 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 KIAA0754O94854 1291 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 NDUFA10O95299 355 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF28P17035 718 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 TCN2P20062 427 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 LPOP22079 712 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 FECHP22830 423 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 CETN2P41208 172 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 CSRP3P50461 194 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 TAF1AQ15573 450 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 RPE65Q16518 533 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 FAM83HQ6ZRV2 1179 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 PPP1R3BQ86XI6 285 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 GALNT6Q8NCL4 622 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 C9orf43Q8TAL5 461 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF398Q8TD17 642 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 KLHL6Q8WZ60 621 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 UBXN4Q92575 508 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 APOL2Q9BQE5 337 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 GORASP1Q9BQQ3 440 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 RAB33BQ9H082 229 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms