RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TRIB2Q92519 343 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 RND1Q92730 232 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TEKT1Q969V4 418 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ST6GALNAC6Q969X2 333 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ERLEC1Q96DZ1 483 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 OTUB1Q96FW1 271 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 PRMT6Q96LA8 375 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 APOLD1Q96LR9 279 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CAMK1GQ96NX5 476 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 MUS81Q96NY9 551 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 PARK7Q99497 189 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SEPHS2Q99611 448 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 GFI1Q99684 422 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SH3GL2Q99962 352 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SEMA3CQ99985 751 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 FAM118BQ9BPY3 351 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 MRPL44Q9H9J2 332 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 IARS2Q9NSE4 1012 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM184CQ9NVA4 438 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 POLLQ9UGP5 575 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ITGA11Q9UKX5 1188 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 RNF150Q9ULK6 438 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 NAP1L2Q9ULW6 460 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SNX7Q9UNH6 387 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF541Q9H0D2 1346 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 FEZF1A0PJY2 475 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 OOEPA6NGQ2 149 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MANSC4A6NHS7 340 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PLK4O00444 970 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PPP6CO00743 305 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PTGESO14684 152 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MEIS2O14770 477 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 HS3ST1O14792 307 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PGRMC2O15173 223 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 EIF3DO15371 548 aaKnown RBP eCLIP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SPINT2O43291 252 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 XRCC3O43542 346 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ZIC3O60481 467 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 RTN2O75298 545 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 C1QL1O75973 258 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MOCS3O95396 460 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 GCP02774 474 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 RLN1P04808 185 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TCF4P15884 667 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 GNAZP19086 355 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 EEF1B2P24534 225 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ITGB8P26012 769 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 BDKRB2P30411 391 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 CD86P42081 329 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ARHGAP25P42331 645 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 CASP3P42574 277 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 LIMK1P53667 647 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 RAD23BP54727 409 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ADARP55265 1226 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 NME5P56597 212 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TAS2R38P59533 333 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PTENP60484 403 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ASIC1P78348 528 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ID2Q02363 134 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ST3GAL1Q11201 340 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 INPP5JQ15735 1006 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 EFNB3Q15768 340 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SYT16Q17RD7 645 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF284Q2VY69 593 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TTC31Q49AM3 519 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 LBHQ53QV2 105 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 FRG2Q64ET8 278 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 KCTD18Q6PI47 426 aaPredicted RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 FAM198BQ6UWH4 519 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 C15orf39Q6ZRI6 1047 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SLC16A12Q6ZSM3 486 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF534Q76KX8 674 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MON1BQ7L1V2 547 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MEPCEQ7L2J0 689 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 FOXRED2Q8IWF2 684 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 HSCBQ8IWL3 235 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PEX5LQ8IYB4 626 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PCDH20Q8N6Y1 951 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 EMC1Q8N766 993 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TRIML1Q8N9V2 468 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MIGA1Q8NAN2 632 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 DBF4BQ8NFT6 615 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 OR2AK2Q8NG84 335 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 OR7G3Q8NG95 312 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 BBS10Q8TAM1 723 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM174Q8WUU8 243 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 DNASE1L2Q92874 299 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MIB2Q96AX9 1013 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 ZFYVE19Q96K21 471 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 NLRP4Q96MN2 994 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 LRRC3BQ96PB8 259 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 PRAM1Q96QH2 718 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 OR6C1Q96RD1 312 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 SIGLEC11Q96RL6 698 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 C16orf70Q9BSU1 422 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 FSD1Q9BTV5 496 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 FNDC11Q9BVV2 318 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 MOV10L1Q9BXT6 1211 aaKnown RBP3.08□□□□□ -1.92
TRAV28-201ENST00000557548 WNT5BQ9H1J7 359 aa3.08□□□□□ -1.92
TRAV28-201ENST00000557548 DPAGT1Q9H3H5 408 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms