RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 ZNF547Q8IVP9 402 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 NDUFAF2Q8N183 169 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 SLC30A5Q8TAD4 765 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 SLC20A1Q8WUM9 679 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 CLIP3Q96DZ5 547 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 GBP5Q96PP8 586 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 LYSMD1Q96S90 227 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 NAA15Q9BXJ9 866 aaKnown RBP10.12□□□□□ -0.79
TRAV33-201ENST00000557514 ACTR5Q9H9F9 607 aaPredicted RBP10.12□□□□□ -0.79
TRAV33-201ENST00000557514 AP4E1Q9UPM8 1137 aa10.12□□□□□ -0.79
TRAV33-201ENST00000557514 TCRBV5S1A1TA0A578 114 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 UBA6A0AVT1 1052 aaPredicted RBP10.11□□□□□ -0.79
TRAV33-201ENST00000557514 LCA5LO95447 670 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
TRAV33-201ENST00000557514 MSL3P1P0C860 447 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ZNF7P17097 686 aaPredicted RBP10.11□□□□□ -0.79
TRAV33-201ENST00000557514 AGAP20933 346 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 IL4RP24394 825 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 CA7P43166 264 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ART1P52961 327 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 DRG2P55039 364 aaKnown RBP10.11□□□□□ -0.79
TRAV33-201ENST00000557514 FMO1Q01740 532 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 SSPNQ14714 243 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 PLCL1Q15111 1095 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ZNF569Q5MCW4 686 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 TMTC4Q5T4D3 741 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
TRAV33-201ENST00000557514 XKRXQ6PP77 449 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 PPP1R32Q7Z5V6 425 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ADGRG6Q86SQ4 1221 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 OR1L3Q8NH93 324 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 DNAJB14Q8TBM8 379 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 CHTF18Q8WVB6 975 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 NR4A3Q92570 626 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 SELENOOQ9BVL4 669 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 TLR10Q9BXR5 811 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 FAM83DQ9H4H8 585 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 FANCEQ9HB96 536 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 ARFGAP3Q9NP61 516 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 SOHLH2Q9NX45 425 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 WDR37Q9Y2I8 494 aa10.11□□□□□ -0.79
TRAV33-201ENST00000557514 CNTRLQ7Z7A1 2325 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 TRGV8A0A0C4DH27 118 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 RGSL1A5PLK6 1076 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 SIGLEC16A6NMB1 481 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CCL21O00585 134 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 KMOO15229 486 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 LDB2O43679 373 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 MAFKO60675 156 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CLDN7O95471 211 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 UNGP13051 313 aaPredicted RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CHRNB2P17787 502 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CYP2A7P20853 494 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 IDSP22304 550 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 PBX1P40424 430 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 KIR3DL1P43629 444 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 MMP13P45452 471 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 ARCN1P48444 511 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CDR2Q01850 454 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 AIMP2Q13155 320 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 DPYSQ14117 519 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 IHHQ14623 411 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 ASIC2Q16515 512 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 RPUSD3Q6P087 351 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 C11orf96Q7Z7L8 435 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 LRRTM4Q86VH4 590 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CEP97Q8IW35 865 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 BBS5Q8N3I7 341 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 OR2Y1Q8NGV0 311 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 CNDP1Q96KN2 507 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 PPM1MQ96MI6 270 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 MCEEQ96PE7 176 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 C17orf62Q9BQA9 187 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 TDRD1Q9BXT4 1180 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 DHX35Q9H5Z1 703 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 SYTL2Q9HCH5 934 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 TRIM39Q9HCM9 518 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 DTLQ9NZJ0 730 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 HOOK1Q9UJC3 728 aaKnown RBP10.1□□□□□ -0.79
TRAV33-201ENST00000557514 ZDHHC9Q9Y397 364 aa10.1□□□□□ -0.79
TRAV33-201ENST00000557514 VPS13CQ709C8 3753 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 CSPG4Q6UVK1 2322 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 C1orf232A0A0U1RR37 186 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 TMEM200CA6NKL6 621 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 UCHL3P15374 230 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 FOLR3P41439 243 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 HALP42357 657 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
TRAV33-201ENST00000557514 EPHB1P54762 984 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 DCDC1P59894 354 aa10.09□□□□□ -0.79
TRAV33-201ENST00000557514 RPL7AP62424 266 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms