RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 C6orf141Q5SZD1 244 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 ALG1LQ6GMV1 187 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
SHMT2-232ENST00000557487 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 FNDC5Q8NAU1 212 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 BLOC1S5Q8TDH9 187 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 MUL1Q969V5 352 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 CDKN2AIPNLQ96HQ2 116 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 BTN2A3PQ96KV6 586 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 FAM118AQ9NWS6 357 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 SMPD4Q9NXE4 827 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 Q9Y3F1 56 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 NAALAD2Q9Y3Q0 740 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 TIMM22Q9Y584 194 aa16.1■□□□□ 0.17
SHMT2-232ENST00000557487 A0A1W2PQH9 124 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MEIS3P2A8K0S8 358 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 RAMP2O60895 175 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 B3GAT3O94766 335 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 NDST3O95803 873 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ALOX5P09917 674 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 JAK1P23458 1154 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 CASP2P42575 452 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MTHFRP42898 656 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SERINC3Q13530 473 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 IHHQ14623 411 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TSNQ15631 228 aaKnown RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 RBBP7Q16576 425 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SMU1Q2TAY7 513 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MS4A13Q5J8X5 152 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TMEM214Q6NUQ4 689 aaKnown RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 NCCRP1Q6ZVX7 275 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ITIH5Q86UX2 942 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 LRRTM3Q86VH5 581 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ANKRD13BQ86YJ7 626 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 CPNE9Q8IYJ1 553 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 PARP8Q8N3A8 854 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 PGBD5Q8N414 524 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 DTWD1Q8N5C7 304 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 PIK3C3Q8NEB9 887 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 OR10T2Q8NGX3 314 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 CCDC138Q96M89 665 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SH3GL1Q99961 368 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SEMA3CQ99985 751 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 NEURL2Q9BR09 285 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 OSBPL10Q9BXB5 764 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MROQ9BYG7 248 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ADNPQ9H2P0 1102 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 FBXO44Q9H4M3 255 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SOX17Q9H6I2 414 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ENPP5Q9UJA9 477 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 ARL5AQ9Y689 179 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 COMMD10Q9Y6G5 202 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 PTPRDP23468 1912 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 C1orf232A0A0U1RR37 186 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 DRGXA6NNA5 263 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MGEA5O60502 916 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 VPS26AO75436 327 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 NDUFS3O75489 264 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 RSL1D1O76021 490 aaKnown RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 UGT2B4P06133 528 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SERPINF2P08697 491 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 IL12AP29459 219 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 MAPKAPK2P49137 400 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TPD52P55327 224 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 BFSP2Q13515 415 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 POLD3Q15054 466 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TRIM16LQ309B1 348 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 PYCR3Q53H96 274 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 EGFLAMQ63HQ2 1017 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 AGMOQ6ZNB7 445 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SPNS2Q8IVW8 549 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TRIM8Q9BZR9 551 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 TOR3AQ9H497 397 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
SHMT2-232ENST00000557487 A0A1B0GTL3 188 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 PRAMEF11O60813 436 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 SCELO95171 688 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 RPLP2P05387 115 aaKnown RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CCDC159P0C7I6 412 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 MSH3P20585 1137 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CES1P23141 567 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CCR3P51677 355 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 ATP1A4Q13733 1029 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 ZNF235Q14590 738 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 ZIK1Q3SY52 487 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 ZC3H12BQ5HYM0 836 aaKnown RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 SULT1C3Q6IMI6 304 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CHST15Q7LFX5 561 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 IGFN1Q86VF2 1251 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 PNPLA1Q8N8W4 532 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 CHDHQ8NE62 594 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-232ENST00000557487 ABHD11Q8NFV4 315 aa16.08■□□□□ 0.16
SHMT2-232ENST00000557487 OR2T11Q8NH01 316 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms