RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PYGO2Q9BRQ0 406 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 ERVMER34-1Q9H9K5 563 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 CNOT8Q9UFF9 292 aaKnown RBP3.82□□□□□ -1.8
VRK1-207ENST00000557352 CLIC4Q9Y696 253 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 MAU2Q9Y6X3 613 aa3.82□□□□□ -1.8
VRK1-207ENST00000557352 TSPOAP1O95153 1857 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 ZC3H13Q5T200 1668 aaKnown RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 KDM6BO15054 1643 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 REREQ9P2R6 1566 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 FAM135AQ9P2D6 1515 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 FANCAO15360 1455 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 C9orf84Q5VXU9 1444 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 DHX57Q6P158 1386 aaKnown RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 RAB3GAP2Q9H2M9 1393 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 DISP3Q9P2K9 1392 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 A0A1W2PRG0 241 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 A6NL46 340 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 EIF4E1BA6NMX2 242 aaKnown RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 CLIC2O15247 247 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 SYNCRIPO60506 623 aaKnown RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 KRT2P35908 639 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 F2RL1P55085 397 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 RAB6CQ53S08 254 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 PACS1Q6VY07 963 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 STXBP4Q6ZWJ1 553 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 PM20D2Q8IYS1 436 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 DDHD1Q8NEL9 900 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 HM13Q8TCT9 377 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 ZNF653Q96CK0 615 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 EGFL8Q99944 293 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 STRA6Q9BX79 667 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 RAB6CQ9H0N0 254 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 RAD21L1Q9H4I0 556 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 SCPEP1Q9HB40 452 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 FGF22Q9HCT0 170 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 INTS10Q9NVR2 710 aaKnown RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 DLGAP2Q9P1A6 1054 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 UBA2Q9UBT2 640 aaPredicted RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 CFDP1Q9UEE9 299 aaPredicted RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 POLR1AO95602 1720 aaPredicted RBP3.81□□□□□ -1.8
VRK1-207ENST00000557352 TET3O43151 1660 aa3.81□□□□□ -1.8
VRK1-207ENST00000557352 VWDEQ8N2E2 1590 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 NEURL4Q96JN8 1562 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ATP7AQ04656 1500 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ZNF518AQ6AHZ1 1483 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ERBINQ96RT1 1412 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ANKRD30AQ9BXX3 1397 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ATP2A1O14983 1001 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 SLC22A2O15244 555 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PAGE4O60829 102 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 KRT19P08727 400 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 HARS2P49590 506 aaKnown RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 TUBP50607 506 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 BIRC3Q13489 604 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 DUOXA1Q1HG43 343 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 ASPRV1Q53RT3 343 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 SDCCAG8Q86SQ7 713 aaPredicted RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 SLC38A9Q8NBW4 561 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PRMT6Q96LA8 375 aaPredicted RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 LINC00479Q96M42 142 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PIP5K1AQ99755 562 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 SEMA3CQ99985 751 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 SLX1AQ9BQ83 275 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PAIP1Q9H074 479 aaKnown RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 PIGMQ9H3S5 423 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PDZD7Q9H5P4 517 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 APOBEC3GQ9HC16 384 aaKnown RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 SLC38A7Q9NVC3 462 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 MRPS28Q9Y2Q9 187 aaKnown RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 CEP152O94986 1710 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 SPHKAPQ2M3C7 1700 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 FRMPD1Q5SYB0 1578 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 PRDM15P57071 1507 aaPredicted RBP3.8□□□□□ -1.8
VRK1-207ENST00000557352 ARHGEF12Q9NZN5 1544 aa3.8□□□□□ -1.8
VRK1-207ENST00000557352 TEX14Q8IWB6 1497 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 MLH3Q9UHC1 1453 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 FLT1P17948 1338 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 KANSL1LA0AUZ9 987 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 SH2B2O14492 632 aaPredicted RBP3.79□□□□□ -1.8
VRK1-207ENST00000557352 TGFB1I1O43294 461 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ARHGEF9O43307 516 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ICAM1P05362 532 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 PYGLP06737 847 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 LIPFP07098 398 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 CEACAM1P13688 526 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 GNAZP19086 355 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 HOXC13P31276 330 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ICAM3P32942 547 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 PRCPP42785 496 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 MAPK9P45984 424 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
VRK1-207ENST00000557352 LMO4P61968 165 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 FRG1Q14331 258 aaKnown RBP3.79□□□□□ -1.8
VRK1-207ENST00000557352 MFSD6Q6ZSS7 791 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms