RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 RBFAQ8N0V3 343 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 LSMEM2Q8N112 164 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 WDR48Q8TAF3 677 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 MAPK15Q8TD08 544 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 MAML1Q92585 1016 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 NAT6Q93015 286 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 TSACCQ96A04 125 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 FAF2Q96CS3 445 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 COQ10AQ96MF6 247 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 WDR92Q96MX6 357 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 YIPF2Q9BWQ6 316 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 POLR1EQ9GZS1 481 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CLPBQ9H078 707 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 TCEAL2Q9H3H9 227 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 C1GALT1Q9NS00 363 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 ABHD10Q9NUJ1 306 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 FBXO9Q9UK97 447 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 OR1A2Q9Y585 309 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 ZZEF1O43149 2961 aa9.8□□□□□ -0.84
HNRNPC-228ENST00000557033 CPED1A4D0V7 1026 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 A8MX80 341 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF487B1APH4 448 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 KDM1AO60341 852 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PGLSO95336 258 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PCCBP05166 539 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 CYP2A6P11509 494 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 MYF5P13349 255 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 AGXTP21549 392 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 KDELR1P24390 212 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 VIPR1P32241 457 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ACTN2P35609 894 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 BCL6P41182 706 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 MAXP61244 160 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ACOX1Q15067 660 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 GUSBP11Q6P575 273 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 OVCH2Q7RTZ1 564 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 EFL1Q7Z2Z2 1120 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 RD3Q7Z3Z2 195 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 CPNE8Q86YQ8 564 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 RHOT2Q8IXI1 618 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 SLC35F3Q8IY50 421 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ARL10Q8N8L6 244 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PLA2G15Q8NCC3 412 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 FAM156AQ8NDB6 213 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ACRBPQ8NEB7 543 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 OR6C4Q8NGE1 309 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 OR56A4Q8NGH8 313 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PIWIL2Q8TC59 973 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PDCD6IPQ8WUM4 868 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 FGF11Q92914 225 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 FUBP1Q96AE4 644 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 RBM15Q96T37 977 aaKnown RBP eCLIP9.79□□□□□ -0.845e-72■■■■■ 63.9
HNRNPC-228ENST00000557033 CHP1Q99653 195 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 SEMA3CQ99985 751 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 JAM3Q9BX67 310 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PACSIN1Q9BY11 444 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF69Q9UC07 566 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 KLQ9UEF7 1012 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 PADI4Q9UM07 663 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
HNRNPC-228ENST00000557033 ADAMTS20P59510 1910 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 KNTC1P50748 2209 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TMEM202A6NGA9 273 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 RRP8O43159 456 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 MFAP3LO75121 409 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 CSO75390 466 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 MTA2O94776 668 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 CCNB1P14635 433 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 GM2AP17900 193 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 KRT15P19012 456 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TGM2P21980 687 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 CA4P22748 312 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TEAD1P28347 426 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 EIF2S3P41091 472 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 SLC1A1P43005 524 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 MTNR1BP49286 362 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TAS2R40P59535 323 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 DPTQ07507 201 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TRAF2Q12933 501 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 ARHGEF7Q14155 803 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 MESDQ14696 234 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 CNGA3Q16281 694 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 LONRF1Q17RB8 773 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 ISXQ2M1V0 245 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 LRRC38Q5VT99 294 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 OGFOD3Q6PK18 319 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 USP45Q70EL2 814 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 PCGF5Q86SE9 256 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 CNGA4Q8IV77 575 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 PQLC3Q8N755 202 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 PIH1D2Q8WWB5 315 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 HDAC11Q96DB2 347 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 NUS1Q96E22 293 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 RNF157Q96PX1 679 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms