RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 OR2AG2A6NM03 316 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 OR52A4PA6NMU1 304 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 PDZK1P1A8MUH7 402 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 CCL22O00626 93 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 CRTAMO95727 393 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 TCP1P17987 556 aaKnown RBP10.14□□□□□ -0.79
SHMT2-224ENST00000556737 RPL10P27635 214 aaKnown RBP10.14□□□□□ -0.79
SHMT2-224ENST00000556737 MAPK10P53779 464 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 UCNP55089 124 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 CXADRP78310 365 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 CLCA4Q14CN2 919 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 TGIF1Q15583 401 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 P3H1Q32P28 736 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 BCL7AQ4VC05 210 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 ARHGAP22Q7Z5H3 698 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 DTX1Q86Y01 620 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 TAB3Q8N5C8 712 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-224ENST00000556737 BEND7Q8N7W2 519 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-224ENST00000556737 AVL9Q8NBF6 648 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF398Q8TD17 642 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 USP7Q93009 1102 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 SH3KBP1Q96B97 665 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 DNAJC1Q96KC8 554 aaKnown RBP10.14□□□□□ -0.79
SHMT2-224ENST00000556737 OSBPL9Q96SU4 736 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 TLR10Q9BXR5 811 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 B3GNT4Q9C0J1 378 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 LRRC40Q9H9A6 602 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 POT1Q9NUX5 634 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 SNX12Q9UMY4 172 aa10.14□□□□□ -0.79
SHMT2-224ENST00000556737 IGLV3-16A0A075B6K0 115 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 TRBV5-4A0A0C4DH59 114 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 H7C0S8 307 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 FANCGO15287 622 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 CEP104O60308 925 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 POP7O75817 140 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 C9P02748 559 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PRSS56P0CW18 603 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 LIPCP11150 499 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 IDSP22304 550 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PSMA3P25788 255 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 AKT1P31749 480 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PAFAH1B1P43034 410 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 MAPK9P45984 424 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 CDKN1CP49918 316 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 GFERP55789 205 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 TMPRSS15P98073 1019 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PDE1BQ01064 536 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 SRSF6Q13247 344 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 GPR18Q14330 331 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 NFE2L1Q14494 772 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF658BQ4V348 819 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 BROXQ5VW32 411 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 TMEM220Q6QAJ8 160 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 TMEM26Q6ZUK4 368 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 DET1Q7L5Y6 550 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 GPR155Q7Z3F1 870 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PRUNE1Q86TP1 453 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 AMZ2Q86W34 360 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 NXPE1Q8N323 547 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 GLIS1Q8NBF1 620 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 AGBL5Q8NDL9 886 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 C1orf54Q8WWF1 131 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 RSC1A1Q92681 617 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 AHCYL2Q96HN2 611 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 LINC00615Q96LM1 132 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 TTC25Q96NG3 672 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 FRMD8P1Q9BZ68 369 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 ZMYND15Q9H091 742 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 EPB41L1Q9H4G0 881 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 ASB8Q9H765 288 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 SLC40A1Q9NP59 571 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 NLE1Q9NVX2 485 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PIH1D1Q9NWS0 290 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 OCIAD1Q9NX40 245 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 SIDT1Q9NXL6 827 aaKnown RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 PCDHGA3Q9Y5H0 932 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-224ENST00000556737 SLC30A1Q9Y6M5 507 aa10.13□□□□□ -0.79
SHMT2-224ENST00000556737 KALRNO60229 2985 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 AHCTF1Q8WYP5 2266 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TEX51A0A1B0GUA7 166 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 MROH6A6NGR9 719 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 EFCAB7A8K855 629 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 B4E171 279 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 K7ENP7 123 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF185O15231 689 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 EFSO43281 561 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 KCNJ13O60928 360 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 SUN1O94901 812 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 VIPP01282 170 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ANKRD34CP0C6C1 535 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TPH1P17752 444 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 VCLP18206 1134 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms