RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ESX1Q8N693 406 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 RNF31Q96EP0 1072 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 ZDHHC12Q96GR4 267 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 OR6C1Q96RD1 312 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 ZNF768Q9H5H4 540 aaKnown RBP22.17■■□□□ 1.14
ACTN1-220ENST00000556433 CLMPQ9H6B4 373 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 IL17BQ9UHF5 180 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 DNMT3AQ9Y6K1 912 aaPredicted RBP22.17■■□□□ 1.14
ACTN1-220ENST00000556433 OR2AG2A6NM03 316 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 APOC4-APOC2K7ER74 178 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 SUV39H1O43463 412 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 APOC2P02655 101 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 CYLC1P35663 651 aaPredicted RBP22.16■■□□□ 1.14
ACTN1-220ENST00000556433 CAPZBP47756 277 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 GEMP55040 296 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 POLE2P56282 527 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 DMPKQ09013 629 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 IRGCQ6NXR0 463 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 FAM92BQ6ZTR7 304 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 DDHD1Q8NEL9 900 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 ZNF398Q8TD17 642 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 FICDQ9BVA6 458 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 ULBP3Q9BZM4 244 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 TRIM4Q9C037 500 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 PSMD13Q9UNM6 376 aa22.16■■□□□ 1.14
ACTN1-220ENST00000556433 TLN1Q9Y490 2541 aaKnown RBP22.15■■□□□ 1.14
ACTN1-220ENST00000556433 GAPDHSO14556 408 aaPredicted RBP22.15■■□□□ 1.14
ACTN1-220ENST00000556433 ANXA9O76027 345 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 ZNF28P17035 718 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 COPS2P61201 443 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 KCNAB2Q13303 367 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 MAP7Q14244 749 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 IL11RAQ14626 422 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 RPE65Q16518 533 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 ITPRIPL1Q6GPH6 555 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 FAM83HQ6ZRV2 1179 aaPredicted RBP22.15■■□□□ 1.14
ACTN1-220ENST00000556433 PRSS42Q7Z5A4 293 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 KLHL6Q8WZ60 621 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 ELMO2Q96JJ3 720 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 FERMT1Q9BQL6 677 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 GBA3Q9H227 469 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 EPHA6Q9UF33 1036 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 RPS6KL1Q9Y6S9 549 aa22.15■■□□□ 1.14
ACTN1-220ENST00000556433 MSH3P20585 1137 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 AKT1P31749 480 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 STAT5AP42229 794 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 MC1RQ01726 317 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 CDC20Q12834 499 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 NFE2L1Q14494 772 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 LONRF2Q1L5Z9 754 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 C6orf15Q6UXA7 325 aaPredicted RBP22.14■■□□□ 1.13
ACTN1-220ENST00000556433 RASGRP3Q8IV61 690 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 ACTL9Q8TC94 416 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 RAB33BQ9H082 229 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 PCDHA3Q9Y5H8 950 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 ARL5AQ9Y689 179 aa22.14■■□□□ 1.13
ACTN1-220ENST00000556433 EPN1Q9Y6I3 576 aaPredicted RBP22.14■■□□□ 1.13
ACTN1-220ENST00000556433 MACROD2A1Z1Q3 448 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 C2orf81A6NN90 581 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 TCN2P20062 427 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 LPOP22079 712 aaPredicted RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 FECHP22830 423 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 PBLDP30039 288 aaPredicted RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 CTNNA1P35221 906 aaKnown RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 NAP1L1P55209 391 aaKnown RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 OTUD4Q01804 1114 aaKnown RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 TAF1AQ15573 450 aaPredicted RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 FNBP1LQ5T0N5 605 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 C16orf46Q6P387 395 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 RANBP10Q6VN20 620 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 DET1Q7L5Y6 550 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 GALNT6Q8NCL4 622 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 OR4K2Q8NGD2 314 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 GPR150Q8NGU9 434 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 STARD8Q92502 1023 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 COL26A1Q96A83 441 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 ZNF514Q96K75 400 aaPredicted RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 APOL2Q9BQE5 337 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 GORASP1Q9BQQ3 440 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 SMOXQ9NWM0 555 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 EFR3BQ9Y2G0 817 aa22.13■■□□□ 1.13
ACTN1-220ENST00000556433 AAR2Q9Y312 384 aaKnown RBP22.13■■□□□ 1.13
ACTN1-220ENST00000556433 TERTO14746 1132 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 KIAA0754O94854 1291 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 NDUFA10O95299 355 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 PRAMEF1O95521 474 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 FGF5P12034 268 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 F8A1P23610 371 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 CTNNA2P26232 953 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 OAS2P29728 719 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 DLSTP36957 453 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 CSRP3P50461 194 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 EIF3EP60228 445 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 PRPSAP1Q14558 356 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 DEFB109BQ30KR1 87 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 ANKRD20A2Q5SQ80 823 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 ANKRD20A1Q5TYW2 823 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 ANKRD20A3Q5VUR7 823 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 METRNLQ641Q3 311 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 KLHL35Q6PF15 583 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms