RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PIM3Q86V86 326 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 HEXDCQ8WVB3 486 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 SH3KBP1Q96B97 665 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ZNF578Q96N58 590 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 SLC38A3Q99624 504 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 COPS8Q99627 209 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 DPYSL5Q9BPU6 564 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 NUDT22Q9BRQ3 303 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 CASS4Q9NQ75 786 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 WASH6PQ9NQA3 447 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 KCNK4Q9NYG8 393 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 CPNE7Q9UBL6 633 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 DNMT3AQ9Y6K1 912 aaPredicted RBP11.34□□□□□ -0.59
SLIRP-205ENST00000556310 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
SLIRP-205ENST00000556310 IGLV3-16A0A075B6K0 115 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TRBV23OR9-2A0A075B6M9 112 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 HEATR9A2RTY3 570 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 LILRA5A6NI73 299 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CES2O00748 559 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 PLD2O14939 933 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TLX3O43711 291 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 DUX1O43812 170 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 POP7O75817 140 aaKnown RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 XRCC1P18887 633 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 IDSP22304 550 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CD1CP29017 333 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CSF2RBP32927 897 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 GRIA1P42261 906 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 EPHA4P54764 986 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 BASP1P80723 227 aaKnown RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CACNG1Q06432 222 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 SKIDA1Q1XH10 827 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 BCL7AQ4VC05 210 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC38Q502W7 563 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 ZRANB3Q5FWF4 1079 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 FNBP1LQ5T0N5 605 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM220Q6QAJ8 160 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TMPRSS9Q7Z410 1059 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF761Q86XN6 746 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 PEX13Q92968 403 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 DCUN1D1Q96GG9 259 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 MS4A14Q96JA4 679 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 EPB41L1Q9H4G0 881 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 RDH14Q9HBH5 336 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 THSD1Q9NS62 852 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-205ENST00000556310 RIMKLBQ9ULI2 386 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 SNX12Q9UMY4 172 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 CFAP47Q6ZTR5 3102 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
SLIRP-205ENST00000556310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 A0A087WV48 116 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PMS2P1A4D2B8 440 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 AP3B1O00203 1094 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 SGTAO43765 313 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 VIPP01282 170 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ITGA2BP08514 1039 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 BRAFP15056 766 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TPSB2P20231 275 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ADRA1DP25100 572 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ACRV1P26436 265 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 RPL10P27635 214 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 RBMS1P29558 406 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PBLDP30039 288 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 HALP42357 657 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PRLHRP49683 370 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ARSDP51689 593 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 DRG2P55039 364 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 CDK16Q00536 496 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ACVR1Q04771 509 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 NFE2L1Q14494 772 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TPSAB1Q15661 275 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PHF19Q5T6S3 580 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TSTD2Q5T7W7 516 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TTC27Q6P3X3 843 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 FAM83HQ6ZRV2 1179 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 RAB11FIP2Q7L804 512 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TRIM48Q8IWZ4 208 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 FBXO39Q8N4B4 442 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms