RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 RMI1Q9H9A7 625 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 VPS37BQ9H9H4 285 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 POLR1BQ9H9Y6 1135 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 NINJ2Q9NZG7 142 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.895e-7■■■■□ 24
ACTN1-215ENST00000555616 TMEM98Q9Y2Y6 226 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 ENTPD2Q9Y5L3 495 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 OAS3Q9Y6K5 1087 aaKnown RBP9.51□□□□□ -0.89
ACTN1-215ENST00000555616 AK5Q9Y6K8 562 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 RNF215Q9Y6U7 377 aa9.51□□□□□ -0.89
ACTN1-215ENST00000555616 TDRD6O60522 2096 aaKnown RBP9.51□□□□□ -0.89
ACTN1-215ENST00000555616 A0A087WUV0 522 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 A0A1W2PNU3 283 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 A0A1W2PQM1 296 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 MROH6A6NGR9 719 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GPR89AB7ZAQ6 455 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 RIPK2O43353 540 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 TLX3O43711 291 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ACSL3O95573 720 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SLC4A1P02730 911 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 MPOP05164 745 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ABHD2P08910 425 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GPR89BP0CG08 455 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 BPIP17213 487 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LPOP22079 712 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 AK4P27144 223 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 STX2P32856 288 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 HMGCLP35914 325 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 HSD17B3P37058 310 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ACTR1BP42025 376 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LSSP48449 732 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 MAZP56270 477 aaKnown RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ACTR1AP61163 376 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GABREP78334 506 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 CRYMQ14894 314 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SKIDA1Q1XH10 827 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 TSTD2Q5T7W7 516 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ALS2CLQ60I27 953 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 UNC5AQ6ZN44 842 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 C3orf62Q6ZUJ4 267 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 MARK2Q7KZI7 788 aaKnown RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 TMEM135Q86UB9 458 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 PHYKPLQ8IUZ5 450 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 IGDCC3Q8IVU1 814 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LSMEM2Q8N112 164 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 TTC30BQ8N4P2 665 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GABPB2Q8TAK5 448 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 DTX3LQ8TDB6 740 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF669Q96BR6 464 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ATXN7L3BQ96GX2 97 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LIN37Q96GY3 246 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 GFM1Q96RP9 751 aaKnown RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 C19orf43Q9BQ61 176 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 CCDC77Q9BR77 488 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SPATA16Q9BXB7 569 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 FUT8Q9BYC5 575 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ACBD3Q9H3P7 528 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LRRN3Q9H3W5 708 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 SYNDIG1Q9H7V2 258 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 VIPAS39Q9H9C1 493 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 ASCL3Q9NQ33 180 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 CHRAC1Q9NRG0 131 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 RIMKLBQ9ULI2 386 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 PKP3Q9Y446 797 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 PCDHGA8Q9Y5G5 932 aa9.5□□□□□ -0.89
ACTN1-215ENST00000555616 PCYT1BQ9Y5K3 369 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-215ENST00000555616 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 IGSF10Q6WRI0 2623 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 A6NCN8 305 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 MAP2K7O14733 419 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 AURKAO14965 403 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 STX7O15400 261 aaKnown RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 LDB2O43679 373 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 SSTR1P30872 391 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CCKBRP32239 447 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 HADHAP40939 763 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 EIF2S3P41091 472 aaKnown RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ERVPABLB-1P60509 514 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CCL7P80098 99 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 MSLNQ13421 630 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 FRG1Q14331 258 aaKnown RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 SLC29A2Q14542 456 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CASP8Q14790 479 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CLPPQ16740 277 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ANKRD20A4Q4UJ75 823 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 STEAP4Q687X5 459 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 KIAA0930Q6ICG6 404 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CAPN12Q6ZSI9 719 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 B3GNT8Q7Z7M8 397 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 NAGSQ8N159 534 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ARL14Q8N4G2 192 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 STYXQ8WUJ0 223 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms