RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 MAP7Q14244 749 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 ERV3-1Q14264 604 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 INSCQ1MX18 579 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 PLA2G4EQ3MJ16 856 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 NADK2Q4G0N4 442 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 ATP13A5Q4VNC0 1218 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 CCDC70Q6NSX1 233 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 CEACAM20Q6UY09 585 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 LRRTM4Q86VH4 590 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 ZC3H18Q86VM9 953 aaKnown RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 KATNAL2Q8IYT4 538 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 TTC30BQ8N4P2 665 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 P3H4Q92791 437 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 HAUS1Q96CS2 278 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 OXNAD1Q96HP4 312 aaPredicted RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 SRPK1Q96SB4 655 aaKnown RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 ANP32EQ9BTT0 268 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 TBC1D10AQ9BXI6 508 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 TRIM55Q9BYV6 548 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 TRIT1Q9H3H1 467 aaKnown RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 ZNF768Q9H5H4 540 aaKnown RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 BPIFA1Q9NP55 256 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 MLXIPLQ9NP71 852 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 IL26Q9NPH9 171 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 OGFRQ9NZT2 677 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
TDP1-212ENST00000555565 TFR2Q9UP52 801 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 RPS6KL1Q9Y6S9 549 aa10.63□□□□□ -0.71
TDP1-212ENST00000555565 F5H423 210 aaPredicted RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 KMOO15229 486 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 DNAJB5O75953 348 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 CDK14O94921 469 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
TDP1-212ENST00000555565 LDLRP01130 860 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 EPOP01588 193 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 BRAFP15056 766 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 ZNF28P17035 718 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 XRCC1P18887 633 aaPredicted RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 HMGCLP35914 325 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 PMS2P54278 862 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 MRPL49Q13405 166 aaKnown RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 SIRPB2Q5JXA9 342 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 SARM1Q6SZW1 724 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 ABRAXAS1Q6UWZ7 409 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 PID1Q7Z2X4 250 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 C11orf96Q7Z7L8 435 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 APLFQ8IW19 511 aaPredicted RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 SRRM1Q8IYB3 904 aaKnown RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 ZNF567Q8N184 647 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 ESX1Q8N693 406 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 AVL9Q8NBF6 648 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 KRT35Q92764 455 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 MRGPRX2Q96LB1 330 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 QKIQ96PU8 341 aaKnown RBP eCLIP10.62□□□□□ -0.71
TDP1-212ENST00000555565 VPS35Q96QK1 796 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 FCRL5Q96RD9 977 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 TIMM29Q9BSF4 260 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 EPB41L1Q9H4G0 881 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 TRABDQ9H4I3 376 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 UCK1Q9HA47 277 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 CASS4Q9NQ75 786 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 SIDT1Q9NXL6 827 aaKnown RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 KLHL8Q9P2G9 620 aaPredicted RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 ZNF624Q9P2J8 865 aaPredicted RBP10.62□□□□□ -0.71
TDP1-212ENST00000555565 KLHL3Q9UH77 587 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 DNAJC16Q9Y2G8 782 aa10.62□□□□□ -0.71
TDP1-212ENST00000555565 MN1Q10571 1320 aaPredicted RBP10.61□□□□□ -0.71
TDP1-212ENST00000555565 PDZK1P1A8MUH7 402 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 GPR39O43194 453 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A9O60656 530 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 RFPL1O75677 317 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 RECKO95980 971 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 VIPP01282 170 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 C9P02748 559 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A6P19224 532 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A1P22309 533 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A4P22310 534 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 RPL10P27635 214 aaKnown RBP10.61□□□□□ -0.71
TDP1-212ENST00000555565 CA5AP35218 305 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 DLSTP36957 453 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 GFERP55789 205 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 TMEM115Q12893 351 aaPredicted RBP10.61□□□□□ -0.71
TDP1-212ENST00000555565 SLC1A5Q15758 541 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 SEPT7Q16181 437 aaKnown RBP10.61□□□□□ -0.71
TDP1-212ENST00000555565 PRR30Q53SZ7 412 aaPredicted RBP10.61□□□□□ -0.71
TDP1-212ENST00000555565 C11orf63Q6NUN7 778 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 TMEM26Q6ZUK4 368 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 BBS12Q6ZW61 710 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 PLXDC1Q8IUK5 500 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 RCOR2Q8IZ40 523 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 SLC25A41Q8N5S1 370 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 VAT1Q99536 393 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 TRIM5Q9C035 493 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A7Q9HAW7 530 aa10.61□□□□□ -0.71
TDP1-212ENST00000555565 UGT1A10Q9HAW8 530 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms