RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MAPK9P45984 424 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 PPP1R21Q6ZMI0 780 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 SPACA3Q8IXA5 215 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 PIANPQ8IYJ0 282 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 DNAAF3Q8N9W5 541 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 ZNF248Q8NDW4 579 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 OR10G6Q8NH81 332 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 STYXQ8WUJ0 223 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 SH3KBP1Q96B97 665 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 ULK4Q96C45 1275 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 AHCYL2Q96HN2 611 aaKnown RBP20.13■□□□□ 0.81
VTI1B-205ENST00000555543 JRKLQ9Y4A0 524 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 SLC30A1Q9Y6M5 507 aa20.13■□□□□ 0.81
VTI1B-205ENST00000555543 LOC400499M0QZD8 3231 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 PTPRQQ9UMZ3 2332 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 APRTP07741 180 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 JMJD7P0C870 316 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 LMAN1P49257 510 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 EPHA4P54764 986 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 BCL7AQ4VC05 210 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 ZRANB3Q5FWF4 1079 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 TMEM71Q6P5X7 295 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 LRRC69Q6ZNQ3 347 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 TMEM26Q6ZUK4 368 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 TRIM48Q8IWZ4 208 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 SLC35F6Q8N357 371 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 AVL9Q8NBF6 648 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 TMEM159Q96B96 161 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 CDKN2AIPNLQ96HQ2 116 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 MS4A14Q96JA4 679 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 PDLIM2Q96JY6 352 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 ZNF514Q96K75 400 aaPredicted RBP20.12■□□□□ 0.81
VTI1B-205ENST00000555543 COPS8Q99627 209 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 CMKLR1Q99788 373 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 ZMYND15Q9H091 742 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 UCK1Q9HA47 277 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 CASS4Q9NQ75 786 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 SMARCAL1Q9NZC9 954 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 OGFRQ9NZT2 677 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 PSMD13Q9UNM6 376 aa20.12■□□□□ 0.81
VTI1B-205ENST00000555543 DNMT3AQ9Y6K1 912 aaPredicted RBP20.12■□□□□ 0.81
VTI1B-205ENST00000555543 IGLV3-16A0A075B6K0 115 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 OR51F1A6NGY5 319 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 HGSO14964 777 aaPredicted RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 KCNJ13O60928 360 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 VIPP01282 170 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 CCL4P13236 92 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 ACRV1P26436 265 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 SLC5A2P31639 672 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 PPM1FP49593 454 aaPredicted RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 TLE3Q04726 772 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 GPR33Q49SQ1 333 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 WDR74Q6RFH5 385 aaPredicted RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 GSTA5Q7RTV2 222 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 SERPINA9Q86WD7 417 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 JAMLQ86YT9 394 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 RASGEF1CQ8N431 466 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 LILRA3Q8N6C8 439 aaPredicted RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 OR13J1Q8NGT2 312 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 GPR150Q8NGU9 434 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 NCSTNQ92542 709 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 DCUN1D1Q96GG9 259 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 ZNF778Q96MU6 729 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 DPYSL5Q9BPU6 564 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 SLC40A1Q9NP59 571 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 POT1Q9NUX5 634 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 TRMT1Q9NXH9 659 aaKnown RBP20.11■□□□□ 0.81
VTI1B-205ENST00000555543 ZDHHC3Q9NYG2 299 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 PDP2Q9P2J9 529 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 FAM8A1Q9UBU6 413 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 SLC2A6Q9UGQ3 507 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 PCDHGA7Q9Y5G6 932 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 IGSF10Q6WRI0 2623 aa20.11■□□□□ 0.81
VTI1B-205ENST00000555543 MGAT4DA6NG13 374 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 PRLHRP49683 370 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 CACNG1Q06432 222 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 TRA2AQ13595 282 aaKnown RBP eCLIP20.1■□□□□ 0.81
VTI1B-205ENST00000555543 GPR18Q14330 331 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 DBN1Q16643 649 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 METRNLQ641Q3 311 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 TTC27Q6P3X3 843 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 TAS2R42Q7RTR8 314 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 OR2L2Q8NH16 312 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 KCNE4Q8WWG9 221 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 CXorf40BQ96DE9 158 aa20.1■□□□□ 0.81
VTI1B-205ENST00000555543 LINC00615Q96LM1 132 aaPredicted RBP20.1■□□□□ 0.81
VTI1B-205ENST00000555543 EIF2B3Q9NR50 452 aaKnown RBP20.1■□□□□ 0.81
VTI1B-205ENST00000555543 HEATR9A2RTY3 570 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 CCDC162PA2VCL2 907 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 ZSCAN12O43309 604 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 PRAMEF10O60809 474 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 RALBP11234 206 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 ATP1B2P14415 290 aaPredicted RBP20.09■□□□□ 0.81
VTI1B-205ENST00000555543 TYRP1P17643 537 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
VTI1B-205ENST00000555543 FOXN2P32314 431 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 HALP42357 657 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 MAPK10P53779 464 aa20.09■□□□□ 0.81
VTI1B-205ENST00000555543 BASP1P80723 227 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms