RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 ENTPD2Q9Y5L3 495 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 PKD1L2Q7Z442 2459 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 ZZEF1O43149 2961 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CCDC162PA2VCL2 907 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 A6NCN8 305 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 MGAT4DA6NG13 374 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 OR51F1A6NGY5 319 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 AGAP14A8MT82 685 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 QSOX1O00391 747 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 PPM1DO15297 605 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 BRINP1O60477 761 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 AP2A2O94973 939 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 MPOP05164 745 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 XRCC1P18887 633 aaPredicted RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 MGAT1P26572 445 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CA5AP35218 305 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 NSG1P42857 185 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 PRLHRP49683 370 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CDKN1CP49918 316 aaPredicted RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 ARSDP51689 593 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 EPHA4P54764 986 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CRADDP78560 199 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 B4GALNT1Q00973 533 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 DMPKQ09013 629 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 EIF3IQ13347 325 aaKnown RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 NFE2L1Q14494 772 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 ITIH4Q14624 930 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 KCNJ11Q14654 390 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 RTP5Q14D33 572 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 NKAIN2Q5VXU1 208 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 WASH2PQ6VEQ5 465 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CERS6Q6ZMG9 384 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 C11orf96Q7Z7L8 435 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 RBM12BQ8IXT5 1001 aaKnown RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 OR13J1Q8NGT2 312 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 OR2L2Q8NH16 312 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 OR4L1Q8NH43 312 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 WDR36Q8NI36 951 aaKnown RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 HM13Q8TCT9 377 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 LIN37Q96GY3 246 aaPredicted RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 DDX47Q9H0S4 455 aaKnown RBP11.88□□□□□ -0.51
SRP54-206ENST00000555317 EPB41L1Q9H4G0 881 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 RDH14Q9HBH5 336 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 WASH6PQ9NQA3 447 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 CATSPERZQ9NTU4 200 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 SLC2A6Q9UGQ3 507 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 ACSL5Q9ULC5 683 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 SATB2Q9UPW6 733 aa11.88□□□□□ -0.51
SRP54-206ENST00000555317 IGHV1OR21-1A0A087WYE8 117 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PFDN6O15212 129 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 B4GAT1O43505 415 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 FTH1P02794 183 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 GSTM1P09488 218 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 JMJD7P0C870 316 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PRSS56P0CW18 603 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PAMP19021 973 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 CASQ1P31415 396 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 CCKBRP32239 447 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 FOXN2P32314 431 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 MAGEA6P43360 314 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 LSSP48449 732 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PDX1P52945 283 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 UBE2IP63279 158 aaKnown RBP11.87□□□□□ -0.51
SRP54-206ENST00000555317 GSTM4Q03013 218 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 KRT33BQ14525 404 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 DBN1Q16643 649 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 SYTL3Q4VX76 610 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 B3GNT8Q7Z7M8 397 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PROSER1Q86XN7 944 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PPIL6Q8IXY8 311 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PIANPQ8IYJ0 282 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 CFAP206Q8IYR0 622 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 NAT14Q8WUY8 206 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 TMEM159Q96B96 161 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 CMKLR1Q99788 373 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 CCM2Q9BSQ5 444 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 UCK1Q9HA47 277 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 MRM3Q9HC36 420 aaKnown RBP11.87□□□□□ -0.51
SRP54-206ENST00000555317 THSD1Q9NS62 852 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
SRP54-206ENST00000555317 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms