RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CPNE6O95741 557 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 KRT14P02533 472 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 POLBP06746 335 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ITGALP20701 1170 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ADRA1DP25100 572 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PSMA3P25788 255 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ITPKBP27987 946 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 COILP38432 576 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 EIF2S3P41091 472 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 MAPK9P45984 424 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 VPS41P49754 854 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SESN2P58004 480 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 UBE2IP63279 158 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CRADDP78560 199 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 BASP1P80723 227 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SQSTM1Q13501 440 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 XKR5Q6UX68 686 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CFAP206Q8IYR0 622 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 LILRA3Q8N6C8 439 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CLDN19Q8N6F1 224 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 OR13J1Q8NGT2 312 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 NCSTNQ92542 709 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ULK4Q96C45 1275 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 AHCYL2Q96HN2 611 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 NAF1Q96HR8 494 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 C19orf43Q9BQ61 176 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ZCCHC2Q9C0B9 1178 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ASCL3Q9NQ33 180 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CHRAC1Q9NRG0 131 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 RALYQ9UKM9 306 aaKnown RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SNX12Q9UMY4 172 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC6B-205ENST00000555269 TRBV5-4A0A0C4DH59 114 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 MGAT4DA6NG13 374 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 A8MU76 341 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 TMX2-CTNND1H3BSU7 103 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PLD2O14939 933 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ZW10O43264 779 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 GAS8O95995 478 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 VIPP01282 170 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CCL4P13236 92 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SLC2A4P14672 509 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 VCLP18206 1134 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ITIH1P19827 911 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 MSNP26038 577 aaKnown RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ACRV1P26436 265 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CCKBRP32239 447 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CSF2RBP32927 897 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ETV5P41161 510 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 GNG11P61952 73 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CACNG1Q06432 222 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 GPS1Q13098 491 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 DBN1Q16643 649 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 GPR33Q49SQ1 333 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 TSTD2Q5T7W7 516 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 METRNLQ641Q3 311 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 LSMEM2Q8N112 164 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ACTRT1Q8TDG2 376 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 JPH3Q8WXH2 748 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 LIN37Q96GY3 246 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CCDC74BQ96LY2 380 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 RANBP9Q96S59 729 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 INSM2Q96T92 566 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 COPS8Q99627 209 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 STRADBQ9C0K7 418 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 WASH6PQ9NQA3 447 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ZDHHC3Q9NYG2 299 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PISDQ9UG56 409 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 LOXL2Q9Y4K0 774 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CFAP20Q9Y6A4 193 aaKnown RBP12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PRSS21Q9Y6M0 314 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 ACACAQ13085 2346 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 SCN8AQ9UQD0 1980 aa12.18□□□□□ -0.46
TRAPPC6B-205ENST00000555269 IGLV3-16A0A075B6K0 115 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 HEATR9A2RTY3 570 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 PGRMC1O00264 195 aaKnown RBP12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 KCNJ13O60928 360 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 AVILO75366 819 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 GOT2P00505 430 aaKnown RBP12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 TYRP1P17643 537 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 LIMK2P53671 638 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 DMPKQ09013 629 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 RPE65Q16518 533 aa12.17□□□□□ -0.46
TRAPPC6B-205ENST00000555269 CYP1B1Q16678 543 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms