RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DPYSL5Q9BPU6 564 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 TBC1D10AQ9BXI6 508 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 NLE1Q9NVX2 485 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 TRMT1Q9NXH9 659 aaKnown RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 KLHL3Q9UH77 587 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 PCM1Q15154 2024 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 A0A087WV48 116 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 KLK10O43240 276 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 KCNJ13O60928 360 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 TYRP1P17643 537 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 AMD1P17707 334 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 XRCC1P18887 633 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SLC5A2P31639 672 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 RPL22P35268 128 aaKnown RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SLC19A1P41440 591 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 LIMK2P53671 638 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 BASP1P80723 227 aaKnown RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 MSLNQ13421 630 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 NFE2L1Q14494 772 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SKIDA1Q1XH10 827 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 BROXQ5VW32 411 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM71Q6P5X7 295 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 IGF2-ASQ6U949 168 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF574Q6ZN55 896 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM26Q6ZUK4 368 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 MICALCLQ6ZW33 695 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SERPINA9Q86WD7 417 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 SLC35F6Q8N357 371 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 GLIS1Q8NBF1 620 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 OR4D9Q8NGE8 314 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 STYXQ8WUJ0 223 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 HEXDCQ8WVB3 486 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM159Q96B96 161 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 PRR11Q96HE9 360 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 CDKN2AIPNLQ96HQ2 116 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM9Q9P0T7 183 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF624Q9P2J8 865 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 DRG1Q9Y295 367 aaKnown RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 JRKLQ9Y4A0 524 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-213ENST00000554600 BPTFQ12830 3046 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
SHMT2-213ENST00000554600 CELSR3Q9NYQ7 3312 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 PRAMEF33A0A0G2JMD5 474 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 HEATR9A2RTY3 570 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 MGAT4DA6NG13 374 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CDRT15L2A8MXV6 281 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 HGSO14964 777 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 KIF5CO60282 957 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 POLBP06746 335 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 SLC35G4P0C7Q5 338 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 PRSS56P0CW18 603 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 BRAFP15056 766 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 MSNP26038 577 aaKnown RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 ETV5P41161 510 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 GRIA1P42261 906 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 VPS41P49754 854 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CDKN1CP49918 316 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 EPHA4P54764 986 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 SESN2P58004 480 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 UBE2IP63279 158 aaKnown RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CACNG1Q06432 222 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 SEMA5AQ13591 1074 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 TRA2AQ13595 282 aaKnown RBP eCLIP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 LAMB3Q13751 1172 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 GSE1Q14687 1217 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CLCA4Q14CN2 919 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 PLCL1Q15111 1095 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 TRIP13Q15645 432 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 GPR33Q49SQ1 333 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 TMEM164Q5U3C3 297 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 AGAP9Q5VTM2 703 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 ABRAXAS1Q6UWZ7 409 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 C4orf22Q6V702 233 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 FAM83HQ6ZRV2 1179 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 FAM129CQ86XR2 697 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 AGBL5Q8NDL9 886 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 PPHLN1Q8NEY8 458 aaKnown RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 USP7Q93009 1102 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 PBKQ96KB5 322 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 WWP1Q9H0M0 922 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 KCNF1Q9H3M0 494 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 EPB41L1Q9H4G0 881 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 POT1Q9NUX5 634 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 IMP3Q9NV31 184 aaKnown RBP10.46□□□□□ -0.73
SHMT2-213ENST00000554600 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 SMARCAL1Q9NZC9 954 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 WDR37Q9Y2I8 494 aa10.46□□□□□ -0.73
SHMT2-213ENST00000554600 CFAP20Q9Y6A4 193 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms