RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C17orf67Q0P5P2 114 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 PPIGQ13427 754 aaKnown RBP eCLIP2.28□□□□□ -2.04
SRP54-204ENST00000553923 PTK6Q13882 451 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 BYSLQ13895 437 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 IL13RA2Q14627 380 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TNIP1Q15025 636 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SMU1Q2TAY7 513 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 KRTCAP3Q53RY4 240 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ZC2HC1BQ5TFG8 222 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 KIAA0930Q6ICG6 404 aaPredicted RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 GALNT17Q6IS24 598 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ARHGAP11AQ6P4F7 1023 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TRAT1Q6PIZ9 186 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 KBTBD6Q86V97 674 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TICAM1Q8IUC6 712 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SPAG16Q8N0X2 631 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SIX6OS1Q8N1H7 587 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GHDCQ8N2G8 530 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TEX9Q8N6V9 391 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 PLD5Q8N7P1 536 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 MCUQ8NE86 351 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 DNAAF1Q8NEP3 725 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ANKRD20A12PQ8NF67 263 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SPATA22Q8NHS9 363 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 KCNE4Q8WWG9 221 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TRIB2Q92519 343 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 HSPH1Q92598 858 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TAF4BQ92750 862 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GTF3C6Q969F1 213 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 FAM149B1Q96BN6 582 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 FER1L6-AS2Q96M78 137 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TMEM237Q96Q45 408 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 F2RL3Q96RI0 385 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 PAFAH2Q99487 392 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 NAA11Q9BSU3 229 aaPredicted RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 NPLQ9BXD5 320 aaPredicted RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 IFIH1Q9BYX4 1025 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 THAP9Q9H5L6 903 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 MVB12BQ9H7P6 319 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 TRPV4Q9HBA0 871 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 BABAM1Q9NWV8 329 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 HPF1Q9NWY4 346 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ADPRHL2Q9NX46 363 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 ARHGEF38Q9NXL2 777 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 GRHL1Q9NZI5 618 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 DNAJB9Q9UBS3 223 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 SEC63Q9UGP8 760 aaKnown RBP2.28□□□□□ -2.04
SRP54-204ENST00000553923 FBXO40Q9UH90 709 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 MTMR6Q9Y217 621 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 PAM16Q9Y3D7 125 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 CCL27Q9Y4X3 112 aa2.28□□□□□ -2.04
SRP54-204ENST00000553923 A0A1W2PRV1 198 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 A4D1N5 150 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 TTC36A6NLP5 189 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 FAM157AC9JC47 383 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 H3BQ06 376 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 TPPPO94811 219 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PENKP01210 267 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 ATP1A1P05023 1023 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 IL7RP16871 459 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ERCC2P18074 760 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 GABRB1P18505 474 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SP100P23497 879 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 PTAFRP25105 342 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 MAPK3P27361 379 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 CPOXP36551 454 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 MTHFRP42898 656 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 CCR10P46092 362 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 CAMPP49913 170 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 CAPZA1P52907 286 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 GALCP54803 685 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 CSE1LP55060 971 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 F2RL1P55085 397 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 HDAC4P56524 1084 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ECT2LQ008S8 904 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 IL1RL1Q01638 556 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ACTN3Q08043 901 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 FAM27E3Q08E93 113 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 IKQ13123 557 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 AIMP2Q13155 320 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 CBX3Q13185 183 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SNTB1Q13884 538 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 VEPH1Q14D04 833 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PCLAFQ15004 111 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PPP2R5BQ15173 497 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 GSTA3Q16772 222 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SYT16Q17RD7 645 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 EDRF1Q3B7T1 1238 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 C2orf76Q3KRA6 126 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PARP10Q53GL7 1025 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 DCAF6Q58WW2 860 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 NHSL2Q5HYW2 709 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 C6orf163Q5TEZ5 329 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 C11orf88Q6PI97 169 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SARM1Q6SZW1 724 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 UNC5DQ6UXZ4 953 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PPP1R21Q6ZMI0 780 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 CLEC17AQ6ZS10 378 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 GSTA5Q7RTV2 222 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 OTOAQ7RTW8 1153 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms