RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PPM1JQ5JR12 505 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 TPRG1LQ5T0D9 272 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 PMS2CLQ68D20 193 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 OTOAQ7RTW8 1153 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 ABI3BPQ7Z7G0 1075 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 TBC1D1Q86TI0 1168 aaPredicted RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 TRABD2AQ86V40 505 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 LRRTM4Q86VH4 590 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 HID1Q8IV36 788 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 CPNE9Q8IYJ1 553 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 ZBTB2Q8N680 514 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 OR56A4Q8NGH8 313 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 PIGKQ92643 395 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 TSACCQ96A04 125 aaPredicted RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 ZNF514Q96K75 400 aaPredicted RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 SCYL1Q96KG9 808 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 ATP6V1G3Q96LB4 118 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 SELENOSQ9BQE4 189 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 ORAI3Q9BRQ5 295 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 CCM2Q9BSQ5 444 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 SLC13A1Q9BZW2 595 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 UNKQ9C0B0 810 aaKnown RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 IQCGQ9H095 443 aaKnown RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 OSGEPL1Q9H4B0 414 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 CARS2Q9HA77 564 aaKnown RBP9.62□□□□□ -0.87
CHD8-204ENST00000553622 GPAMQ9HCL2 828 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 FGF22Q9HCT0 170 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 KCNK9Q9NPC2 374 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 GALPQ9UBC7 116 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 SUFUQ9UMX1 484 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 DNAJC16Q9Y2G8 782 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 CACNA1EQ15878 2313 aa9.62□□□□□ -0.87
CHD8-204ENST00000553622 A0A0C4DFX4 3053 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 A0A087X1B8 175 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 PRSS38A1L453 326 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 C10orf142B7Z368 130 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 COPEO14579 308 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 TOR1BO14657 336 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 KMOO15229 486 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SGTAO43765 313 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 NUAK1O60285 661 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 RFPL1O75677 317 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 POP7O75817 140 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 C2P06681 752 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 APOA4P06727 396 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CEACAM5P06731 702 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 HOXC4P09017 264 aaPredicted RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 CCDC166P0CW27 439 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 ACP5P13686 325 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CNR2P34972 360 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CSNK1EP49674 416 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 SRP54P61011 504 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 IRF9Q00978 393 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 HSPA14Q0VDF9 509 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 DNAJC3Q13217 504 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CSHL1Q14406 222 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 TEAD4Q15561 434 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SEPT7Q16181 437 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 TTLL9Q3SXZ7 439 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 BCL7AQ4VC05 210 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 ZNF542PQ5EBM4 170 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 PAQR3Q6TCH7 311 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 TIFABQ6ZNK6 161 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CHST15Q7LFX5 561 aaPredicted RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 CFAP206Q8IYR0 622 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CNPY4Q8N129 248 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SPATA6LQ8N4H0 392 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 MFSD2AQ8NA29 543 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CD200R1Q8TD46 325 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 OR1E3Q8WZA6 343 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 KCNJ9Q92806 393 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 INPP5DQ92835 1189 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SKA1Q96BD8 255 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 LINGO1Q96FE5 620 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 PDXPQ96GD0 296 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 OR2M4Q96R27 311 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 C1QTNF1Q9BXJ1 281 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 RMI1Q9H9A7 625 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 MED4Q9NPJ6 270 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 TM7SF3Q9NS93 570 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SPATS2LQ9NUQ6 558 aaKnown RBP9.61□□□□□ -0.87
CHD8-204ENST00000553622 DNAJC28Q9NX36 388 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SENP1Q9P0U3 644 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 SLC17A4Q9Y2C5 497 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 ANKRD6Q9Y2G4 727 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 PCDHGA2Q9Y5H1 932 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 R4GN57 208 aa9.61□□□□□ -0.87
CHD8-204ENST00000553622 A0A1B0GTW7 788 aa9.6□□□□□ -0.87
CHD8-204ENST00000553622 A0A1B0GVT2 93 aa9.6□□□□□ -0.87
CHD8-204ENST00000553622 GPR89AB7ZAQ6 455 aa9.6□□□□□ -0.87
CHD8-204ENST00000553622 H3BQF6 201 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms