RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 A8MU76 341 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 STMND1H3BQB6 276 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 PSMD3O43242 534 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 UBXN7O94888 489 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 AMD1P17707 334 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 CA5AP35218 305 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 DRG2P55039 364 aaKnown RBP12.72□□□□□ -0.37
ACTN1-207ENST00000553290 MANEAQ5SRI9 462 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 KCTD11Q693B1 232 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 OR13C4Q8NGS5 318 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 HEXDCQ8WVB3 486 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 ULK4Q96C45 1275 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 TEFMQ96QE5 360 aaKnown RBP12.72□□□□□ -0.37
ACTN1-207ENST00000553290 TMEM121Q9BTD3 319 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-207ENST00000553290 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 OCIAD1Q9NX40 245 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 GUCA1BQ9UMX6 200 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 R3HDM2Q9Y2K5 976 aaKnown RBP12.72□□□□□ -0.37
ACTN1-207ENST00000553290 KCTD3Q9Y597 815 aa12.72□□□□□ -0.37
ACTN1-207ENST00000553290 KALRNO60229 2985 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 OR52A4PA6NMU1 304 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 AGAP14A8MT82 685 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-207ENST00000553290 EFSO43281 561 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 METTL18O95568 372 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 C9P02748 559 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 ANKRD34CP0C6C1 535 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 RALBP11234 206 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 ITGALP20701 1170 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 STIP1P31948 543 aaKnown RBP12.71□□□□□ -0.37
ACTN1-207ENST00000553290 ATP1A2P50993 1020 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF140P52738 457 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-207ENST00000553290 XIAPP98170 497 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 MC2RQ01718 297 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 SPARCL1Q14515 664 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 CLCA4Q14CN2 919 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 GPR33Q49SQ1 333 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 TAF1BQ53T94 588 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-207ENST00000553290 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 BEND7Q8N7W2 519 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-207ENST00000553290 BMPERQ8N8U9 685 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 RTP4Q96DX8 246 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 SGF29Q96ES7 293 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 DCUN1D1Q96GG9 259 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 ZPBPQ9BS86 351 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 FBXO8Q9NRD0 319 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 OGFRQ9NZT2 677 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 CRLS1Q9UJA2 301 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 WDR37Q9Y2I8 494 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 B3GALT1Q9Y5Z6 326 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 SLC30A1Q9Y6M5 507 aa12.71□□□□□ -0.37
ACTN1-207ENST00000553290 SDK2Q58EX2 2172 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
ACTN1-207ENST00000553290 MGAT4DA6NG13 374 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 CFAP99D6REC4 459 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 LDB2O43679 373 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 AP2A1O95782 977 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 TYRP1P17643 537 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-207ENST00000553290 CAPZBP47756 277 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 ARSDP51689 593 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 GDF10P55107 478 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 COL9A2Q14055 689 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-207ENST00000553290 GPR18Q14330 331 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 NFE2L1Q14494 772 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 RPE65Q16518 533 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 BCL7AQ4VC05 210 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 METRNLQ641Q3 311 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 LINC00523Q86TU6 105 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 ZSCAN1Q8NBB4 408 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 OR2L2Q8NH16 312 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 TTC9Q92623 222 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 PMEPA1Q969W9 287 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 LINC00615Q96LM1 132 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-207ENST00000553290 C9orf72Q96LT7 481 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 EPHA6Q9UF33 1036 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 KLHL3Q9UH77 587 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 ACSL5Q9ULC5 683 aa12.7□□□□□ -0.38
ACTN1-207ENST00000553290 ERI2A8K979 691 aaKnown RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 H7C0S8 307 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 LIASO43766 372 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 MC4RP32245 332 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 GFERP55789 205 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 C19orf57Q0VDD7 668 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 OASLQ15646 514 aaKnown RBP12.69□□□□□ -0.38
ACTN1-207ENST00000553290 MEI1Q5TIA1 1274 aa12.69□□□□□ -0.38
ACTN1-207ENST00000553290 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms