RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 RGS5O15539 181 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 SEC22BO75396 215 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PGLSO95336 258 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PABPC1P11940 636 aaKnown RBP11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 SIRPB2Q5JXA9 342 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 ANKRD46Q86W74 232 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PHACTR4Q8IZ21 702 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 RBM4BQ9BQ04 359 aaKnown RBP11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 RBM4Q9BWF3 364 aaKnown RBP11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 TREX1Q9NSU2 369 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 USE1Q9NZ43 259 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 KLQ9UEF7 1012 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PKP3Q9Y446 797 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PCDHA9Q9Y5H5 950 aa11.46□□□□□ -0.58
PPFIA2-227ENST00000552948 PDE4DIPQ5VU43 2346 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ARVCFO00192 962 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 FGF10O15520 208 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SULT1C4O75897 302 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 OR4Q2P0C623 313 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 FSHRP23945 695 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 CA8P35219 290 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 FAM174BQ3ZCQ3 159 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 KIAA0319Q5VV43 1072 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 RAP1GAP2Q684P5 730 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 UGT3A1Q6NUS8 523 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ZMIZ2Q8NF64 920 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 LINGO1Q96FE5 620 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 AURKBQ96GD4 344 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ZFYVE19Q96K21 471 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TMEM209Q96SK2 561 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 CSF3RQ99062 836 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MUC13Q9H3R2 512 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 CDH9Q9ULB4 789 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 EIF3LQ9Y262 564 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SNX8Q9Y5X2 465 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MOXD2PA6NHM9 499 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MITFO75030 526 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TCEA1P23193 301 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 S100A1P23297 94 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 GSTM2P28161 218 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 OR1E1P30953 314 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 NR4A2P43354 598 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 COPZ1P61923 177 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ERVK-8P63133 956 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SCAPQ12770 1279 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 EPS8Q12929 822 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TOP3AQ13472 1001 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 AQP6Q13520 282 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ZBTB6Q15916 424 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 C6orf136Q5SQH8 315 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 FAM86B1Q8N7N1 296 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 OR4K2Q8NGD2 314 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 PPTC7Q8NI37 304 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC22A17Q8WUG5 538 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 NT5C3BQ969T7 300 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 UBXN10Q96LJ8 280 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MYOCQ99972 504 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 SIAEQ9HAT2 523 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 LATS2Q9NRM7 1088 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 DNAJB9Q9UBS3 223 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 A6NL46 340 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TAF4O00268 1085 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 RAMP2O60895 175 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TULP3O75386 442 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 UROSP10746 265 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MSH3P20585 1137 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 IGFBP5P24593 272 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 AXLP30530 894 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 PIGAP37287 484 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ZNF135P52742 658 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ADARB1P78563 741 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 GATAD2AQ86YP4 633 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ARHGAP12Q8IWW6 846 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ARRDC4Q8NCT1 418 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 HDAC2Q92769 488 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 IL12RB2Q99665 862 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 MROH8Q9H579 483 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 PRDM8Q9NQV8 689 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 TMEM30AQ9NV96 361 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ABCD2Q9UBJ2 740 aa11.45□□□□□ -0.58
PPFIA2-227ENST00000552948 ELOVL7A1L3X0 281 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 FAM234BA2RU67 622 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC1A7O00341 560 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 GPR182O15218 404 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 NIPSNAP2O75323 286 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 GJB3O75712 270 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 MLYCDO95822 493 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 SMIM10L2AP0DMW4 78 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 SMIM10L2BP0DMW5 78 aa11.44□□□□□ -0.58
PPFIA2-227ENST00000552948 C7P10643 843 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms