RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TRA2AQ13595 282 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SPIDRQ14159 915 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 KRT33BQ14525 404 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 NR1D2Q14995 579 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SMAD1Q15797 465 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 TTLL9Q3SXZ7 439 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 ANKRD20A4Q4UJ75 823 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 LRRC8EQ6NSJ5 796 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 UGT3A1Q6NUS8 523 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 HIBCHQ6NVY1 386 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 NEPROQ6NW34 567 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 RBM44Q6ZP01 1051 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 RAB44Q7Z6P3 723 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 GALNT7Q86SF2 657 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 TRIM74Q86UV6 250 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CAND1Q86VP6 1230 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 C17orf82Q86X59 251 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SLC35F3Q8IY50 421 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 LSMEM2Q8N112 164 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 PELI3Q8N2H9 469 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 MMGT1Q8N4V1 131 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 RAB42Q8N4Z0 105 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 RASGEF1AQ8N9B8 481 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 MAGEC3Q8TD91 643 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CDKL2Q92772 493 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CXorf40BQ96DE9 158 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 AHCYL2Q96HN2 611 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 GFM1Q96RP9 751 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SLC38A3Q99624 504 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 TCEAL2Q9H3H9 227 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 LRIT1Q9P2V4 623 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 POLG2Q9UHN1 485 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 FAM169AQ9Y6X4 670 aa10.1□□□□□ -0.79
TRAFD1-208ENST00000552890 SPAARA0A1B0GVQ0 90 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 FAM221BA6H8Z2 402 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 LILRA5A6NI73 299 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 MATN2O00339 956 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 GAPDHSO14556 408 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 DUX1O43812 170 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 OPA1O60313 960 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CPNE6O95741 557 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 GIMD1P0DJR0 217 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 GRIA1P42261 906 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SKIV2L2P42285 1042 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 ITGA8P53708 1063 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 HHEXQ03014 270 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 DBN1Q16643 649 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SYTL3Q4VX76 610 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 DNTTIP2Q5QJE6 756 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 N4BP2L1Q5TBK1 243 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 PTRHD1Q6GMV3 140 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CRTC3Q6UUV7 619 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CYS1Q717R9 158 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 TMPRSS7Q7RTY8 843 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 EFL1Q7Z2Z2 1120 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 ZNF438Q7Z4V0 828 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 PIM3Q86V86 326 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 PLXDC1Q8IUK5 500 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CARFQ8N187 725 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 C17orf53Q8N3J3 647 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 ARL14Q8N4G2 192 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 PYROXD1Q8WU10 500 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SGF29Q96ES7 293 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SIGLEC10Q96LC7 697 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 FOPNLQ96NB1 174 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CAMK1GQ96NX5 476 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SUDS3Q9H7L9 328 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 MVB12BQ9H7P6 319 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 PIH1D1Q9NWS0 290 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SYBUQ9NX95 663 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SIRPGQ9P1W8 387 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 TXNDC16Q9P2K2 825 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CPNE7Q9UBL6 633 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 ZC3H7BQ9UGR2 993 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 CLCA2Q9UQC9 943 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 KCTD3Q9Y597 815 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 SPTBN2O15020 2390 aa10.09□□□□□ -0.79
TRAFD1-208ENST00000552890 TMEM8BA6NDV4 472 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 OR2AG2A6NM03 316 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 E5RI56 91 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 GOLGA8MH3BSY2 632 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 EIF3FO00303 357 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 TOX3O15405 576 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 NOBOXO60393 691 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 SNX2O60749 519 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 TMEM63AO94886 807 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 IVDP26440 423 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 CUL1Q13616 776 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 TYSND1Q2T9J0 566 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 BBS9Q3SYG4 887 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 ANKRD22Q5VYY1 191 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 DUPD1Q68J44 220 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 WDR74Q6RFH5 385 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF534Q76KX8 674 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 OTOAQ7RTW8 1153 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms