RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 BTG3Q14201 252 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 CRY1Q16526 586 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 UPP1Q16831 310 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 MARC1Q5VT66 337 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ENPP6Q6UWR7 440 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 AGMOQ6ZNB7 445 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 NCCRP1Q6ZVX7 275 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 BEND5Q7L4P6 421 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 RAB44Q7Z6P3 723 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 STK32CQ86UX6 486 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SFRP1Q8N474 314 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FBXO39Q8N4B4 442 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ABHD11Q8NFV4 315 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 NLGN2Q8NFZ4 835 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 IGSF8Q969P0 613 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 KIAA1191Q96A73 305 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FUBP1Q96AE4 644 aaKnown RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 MBOAT4Q96T53 435 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 BDH2Q9BUT1 245 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FUNDC2Q9BWH2 189 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 BRINP2Q9C0B6 783 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ADNPQ9H2P0 1102 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TFB2MQ9H5Q4 396 aaKnown RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GPN2Q9H9Y4 310 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 PRDM5Q9NQX1 630 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 LEF1Q9UJU2 399 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FBXO10Q9UK96 956 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ST14Q9Y5Y6 855 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TRIM43BA6NCK2 446 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 WASH4PA8MWX3 477 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 CFAP99D6REC4 459 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 HAS3O00219 553 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TOR1BO14657 336 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 KERAO60938 352 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 OR4F21O95013 312 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 INMTO95050 263 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GLP2RO95838 553 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TBX18O95935 607 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 POMCP01189 267 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ENO2P09104 434 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 CDH1P12830 882 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 HOXB8P17481 243 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 PCSK1P29120 753 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FMO4P31512 558 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ACVRL1P37023 503 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 MRPL19P49406 292 aaKnown RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 STC1P52823 247 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 DGKQP52824 942 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GP2P55259 537 aaKnown RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 C18orf21Q32NC0 220 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 C6orf136Q5SQH8 315 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 BROXQ5VW32 411 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 IQSEC1Q6DN90 963 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GRAMD4Q6IC98 578 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 NIPAL1Q6NVV3 410 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SPATA19Q7Z5L4 167 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GPR142Q7Z601 462 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TMEM179BQ7Z7N9 219 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 PROSER1Q86XN7 944 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ABI1Q8IZP0 508 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SCML4Q8N228 414 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 UMODL1-AS1Q8N2C9 162 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TEX26Q8N6G2 289 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 CHDHQ8NE62 594 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 OR52B6Q8NGF0 335 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 OSCP1Q8WVF1 389 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SH3YL1Q96HL8 342 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 NSMCE2Q96MF7 247 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SEMA3CQ99985 751 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ACBD6Q9BR61 282 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 TRIM62Q9BVG3 475 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 DGCR6LQ9BY27 220 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 LRRC3Q9BY71 257 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ALOXE3Q9BYJ1 711 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ING2Q9H160 280 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ABHD16BQ9H3Z7 469 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 IKZF5Q9H5V7 419 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ABCC13Q9NSE7 274 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 FAM118AQ9NWS6 357 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.36□□□□□ -1.55
LIMA1-212ENST00000552491 GMIPQ9P107 970 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SEPT3Q9UH03 358 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 PCTPQ9UKL6 214 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 RNF112Q9ULX5 631 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 ST3GAL5Q9UNP4 418 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 B3GNT3Q9Y2A9 372 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 PCDHB3Q9Y5E6 796 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 SPO11Q9Y5K1 396 aa5.36□□□□□ -1.55
LIMA1-212ENST00000552491 A0A0U1RQS6 177 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 KRBA1A5PL33 1030 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 SNX2O60749 519 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 JRKO75564 520 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 CRCPO75575 148 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 B3GAT3O94766 335 aa5.35□□□□□ -1.55
LIMA1-212ENST00000552491 RHOBTB1O94844 696 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms