RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SYT9Q86SS6 491 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 RASGRP3Q8IV61 690 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 ZNF547Q8IVP9 402 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 LZTR1Q8N653 840 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 KCTD6Q8NC69 237 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 ANKRD20A12PQ8NF67 263 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 CT55Q8WUE5 264 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 NSMCE1Q8WV22 266 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 APOBEC4Q8WW27 367 aaKnown RBP6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 C9orf72Q96LT7 481 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 ASPSCR1Q9BZE9 553 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 POLR1EQ9GZS1 481 aaKnown RBP6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 TWSG1Q9GZX9 223 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 ISCUQ9H1K1 167 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 UGT1A7Q9HAW7 530 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 UGT1A10Q9HAW8 530 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 UGT1A8Q9HAW9 530 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 PDP2Q9P2J9 529 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 PPIL1Q9Y3C6 166 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 HEY1Q9Y5J3 304 aa6.73□□□□□ -1.33
PRPF40B-214ENST00000551320 IGHV5-51A0A0C4DH38 117 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 A6NL46 340 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PSMD11O00231 422 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MATN3O15232 486 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 KRT86O43790 486 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PMPCBO75439 489 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 SPAG6O75602 509 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 UBXN7O94888 489 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 SLC25A14O95258 325 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 NDUFA10O95299 355 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 EBLN1P0CF75 366 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 F3P13726 295 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 BPIP17213 487 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 DESP17661 470 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 AMD1P17707 334 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PCK1P35558 622 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CHRNA4P43681 627 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CCL11P51671 97 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CTSCP53634 463 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 AP1B1Q10567 949 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MRPL49Q13405 166 aaKnown RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 SQSTM1Q13501 440 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 TRA2AQ13595 282 aaKnown RBP eCLIP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 IL10RAQ13651 578 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 GPR18Q14330 331 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 GPR19Q15760 415 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 INSCQ1MX18 579 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CACHD1Q5VU97 1274 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PWWP2BQ6NUJ5 590 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 WDR74Q6RFH5 385 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CEACAM20Q6UY09 585 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 ASB18Q6ZVZ8 466 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 DET1Q7L5Y6 550 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 LUZP1Q86V48 1076 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 TRIM48Q8IWZ4 208 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 SLC25A41Q8N5S1 370 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 LILRA3Q8N6C8 439 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 BEND7Q8N7W2 519 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CCDC112Q8NEF3 446 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MAML1Q92585 1016 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 KIAA1143Q96AT1 154 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MIB2Q96AX9 1013 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 MLPHQ9BV36 600 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 ADNPQ9H2P0 1102 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 GOLPH3Q9H4A6 298 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 SARS2Q9NP81 518 aaKnown RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 FBXO8Q9NRD0 319 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 AIPL1Q9NZN9 384 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 TMEM184BQ9Y519 407 aaPredicted RBP6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CREBBPQ92793 2442 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 PCSK5Q92824 1860 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CACNA1DQ01668 2161 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 CSMD1Q96PZ7 3565 aa6.72□□□□□ -1.33
PRPF40B-214ENST00000551320 ARGFXA6NJG6 315 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 OR2AG2A6NM03 316 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ANKRD66B4E2M5 251 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CCL22O00626 93 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 NUAK1O60285 661 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 WFS1O76024 890 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 SERPINC1P01008 464 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 VIPP01282 170 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CYP1A2P05177 515 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 SFTPCP11686 197 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 GZMAP12544 262 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF7P17097 686 aaPredicted RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 HSPA9P38646 679 aaKnown RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 PRKCIP41743 596 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 MAP2K3P46734 347 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 GPLD1P80108 840 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ADCY2Q08462 1091 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ABHD18Q0P651 414 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 DNASE1L3Q13609 305 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 NFE2L1Q14494 772 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 MESDQ14696 234 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 NR1I3Q14994 352 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 PAFAH1B3Q15102 231 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms