RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PRAMEF13Q5VWM6 474 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AMER2Q8N7J2 671 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AVL9Q8NBF6 648 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 EXD1Q8NHP7 514 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 COG1Q8WTW3 980 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 AGAP4Q96P64 663 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 IP6K3Q96PC2 410 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 ALPK1Q96QP1 1244 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 CINPQ9BW66 212 aaPredicted RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 PADI2Q9Y2J8 665 aa13.08□□□□□ -0.32
SNRPF-203ENST00000551316 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.32
SNRPF-203ENST00000551316 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 C9J4A7 227 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 ADAM10O14672 748 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 PALMO75781 387 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 ZNF202O95125 648 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 CTSBP07858 339 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 PDHA1P08559 390 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 HADHAP40939 763 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 GABRB2P47870 512 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
SNRPF-203ENST00000551316 CLCNKAP51800 687 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 CYP2A13Q16696 494 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 CCDC14Q49A88 953 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 KMT5CQ86Y97 462 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 OR2Y1Q8NGV0 311 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 JOSD2Q8TAC2 188 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 SDCCAG3Q96C92 435 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 RETREG1Q9H6L5 497 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 EPS8L2Q9H6S3 715 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 ABI3Q9P2A4 366 aa13.07□□□□□ -0.32
SNRPF-203ENST00000551316 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 SOCS6O14544 535 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 KLHL41O60662 606 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 PRCPP42785 496 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 STC1P52823 247 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 AP1S1P61966 158 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 MFAP5Q13361 173 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 CUL4AQ13619 759 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 PLCL1Q15111 1095 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 B4GALNT4Q76KP1 1039 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 ZDHHC17Q8IUH5 632 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 ZNF547Q8IVP9 402 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 ARHGAP12Q8IWW6 846 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 DMRTC2Q8IXT2 367 aaPredicted RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 CIARTQ8N365 385 aaPredicted RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 NRTNQ99748 197 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 DHRS4Q9BTZ2 278 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 TSPAN10Q9H1Z9 355 aaPredicted RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 OR2AG1Q9H205 316 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 FAM207AQ9NSI2 230 aaPredicted RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 ZNF835Q9Y2P0 537 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
SNRPF-203ENST00000551316 TGP01266 2768 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 SVEP1Q4LDE5 3571 aa13.06□□□□□ -0.32
SNRPF-203ENST00000551316 UBA6A0AVT1 1052 aaPredicted RBP13.05□□□□□ -0.32
SNRPF-203ENST00000551316 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 ZNF749O43361 778 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 HCRTR1O43613 425 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 ZBTB11O95625 1053 aaPredicted RBP13.05□□□□□ -0.32
SNRPF-203ENST00000551316 CYP2A7P20853 494 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 ME1P48163 572 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 LMAN1P49257 510 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 TNFSF10P50591 281 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 IHHQ14623 411 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 INSCQ1MX18 579 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 KHDC1Q4VXA5 237 aaKnown RBP13.05□□□□□ -0.32
SNRPF-203ENST00000551316 TDRD12Q587J7 1177 aaKnown RBP13.05□□□□□ -0.32
SNRPF-203ENST00000551316 ABRAXAS1Q6UWZ7 409 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 FAM20CQ8IXL6 584 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 NPWQ8N729 165 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 DNAAF3Q8N9W5 541 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 PIH1D2Q8WWB5 315 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 CXorf40BQ96DE9 158 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 LRFN1Q9P244 771 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
SNRPF-203ENST00000551316 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 RNF212BA8MTL3 300 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 SOCS5O75159 536 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 PGLSO95336 258 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 UNGP13051 313 aaPredicted RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 MAXP61244 160 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 YBX1P67809 324 aaKnown RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 FKBP3Q00688 224 aaKnown RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms