RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 LOC101059948A0A1B0GTJ6 334 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 LRRD1A4D1F6 860 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 PDZK1P1A8MUH7 402 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 PPP1R12AO14974 1030 aaPredicted RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 KMOO15229 486 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 NKX2-8O15522 239 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 VEGFDO43915 354 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 UBXN7O94888 489 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 VIPP01282 170 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 TMEM253P0C7T8 217 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 TCN2P20062 427 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 KDELR1P24390 212 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 OAS2P29728 719 aaKnown RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 CAPZBP47756 277 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 SEPT6Q14141 434 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 IL11RAQ14626 422 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 PDK1Q15118 436 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 SLC18A3Q16572 532 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 INSCQ1MX18 579 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 AGAP9Q5VTM2 703 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ALS2CLQ60I27 953 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 SLC9A4Q6AI14 798 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 CYB5D1Q6P9G0 228 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 CRTC3Q6UUV7 619 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ABRAXAS1Q6UWZ7 409 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 WASH2PQ6VEQ5 465 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 TMEM26Q6ZUK4 368 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ADGRG6Q86SQ4 1221 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 NT5DC3Q86UY8 548 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 LUZP1Q86V48 1076 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 LRRTM4Q86VH4 590 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 RBM12BQ8IXT5 1001 aaKnown RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 UNC5BQ8IZJ1 945 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 GPR26Q8NDV2 337 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 C9orf43Q8TAL5 461 aaPredicted RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 LRRN4Q8WUT4 740 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 APOBEC4Q8WW27 367 aaKnown RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 RAPGEF5Q92565 580 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 GLYATL1Q969I3 302 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 OLFM3Q96PB7 478 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 VPS35Q96QK1 796 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 SPATA16Q9BXB7 569 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ULBP3Q9BZM4 244 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 XPO4Q9C0E2 1151 aaKnown RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 BRD8Q9H0E9 1235 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 SLC25A51Q9H1U9 297 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 OSGEPL1Q9H4B0 414 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ZNF768Q9H5H4 540 aaKnown RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 APMAPQ9HDC9 416 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 WASH6PQ9NQA3 447 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 KLC4Q9NSK0 619 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 OGFRQ9NZT2 677 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 PLEKHB1Q9UF11 243 aaPredicted RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 PLAAQ9Y263 795 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 KCTD3Q9Y597 815 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 HEY1Q9Y5J3 304 aa7.5□□□□□ -1.21
NEK3-201ENST00000550331 ARHGEF17Q96PE2 2063 aaPredicted RBP7.5□□□□□ -1.21
NEK3-201ENST00000550331 ABCA12Q86UK0 2595 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 GOLGA6L3A6NEY3 463 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 C3orf70A6NLC5 250 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 APOL1O14791 398 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 KCNJ13O60928 360 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 CDK14O94921 469 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 NDST3O95803 873 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 SLC4A1P02730 911 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 PIRTP0C851 137 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 PRKAR1AP10644 381 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZFXP17010 805 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF28P17035 718 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF7P17097 686 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 BPIP17213 487 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 TYRP1P17643 537 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 AMD1P17707 334 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 VCLP18206 1134 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 CASP14P31944 242 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ARHGAP25P42331 645 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 GFERP55789 205 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 CDK18Q07002 472 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 AP1B1Q10567 949 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 PCSK7Q16549 785 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF648Q5T619 568 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 LRRC38Q5VT99 294 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZDHHC20Q5W0Z9 365 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 CCDC70Q6NSX1 233 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 C6orf15Q6UXA7 325 aaPredicted RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 PRSS42Q7Z5A4 293 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 ZNF547Q8IVP9 402 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 DTX3LQ8TDB6 740 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 KLHL6Q8WZ60 621 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 AGAP3Q96P47 875 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 TGM7Q96PF1 710 aa7.49□□□□□ -1.21
NEK3-201ENST00000550331 MAK16Q9BXY0 300 aaKnown RBP7.49□□□□□ -1.21
NEK3-201ENST00000550331 PACSIN1Q9BY11 444 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms