RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 HPDP32754 393 aaPredicted RBP28.33■■■□□ 2.13
BRF1-213ENST00000548421 THOP1P52888 689 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 PAQR3Q6TCH7 311 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 OTOAQ7RTW8 1153 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 TBC1D1Q86TI0 1168 aaPredicted RBP28.33■■■□□ 2.13
BRF1-213ENST00000548421 INPP5DQ92835 1189 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 WDR92Q96MX6 357 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 SLC30A3Q99726 388 aa28.33■■■□□ 2.13
BRF1-213ENST00000548421 GPR37L1O60883 481 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 SPAG7O75391 227 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 SLC26A3P40879 764 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 IRF9Q00978 393 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 WDR45BQ5MNZ6 344 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 CRTC3Q6UUV7 619 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 TMEM207Q6UWW9 146 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 LRRTM4Q86VH4 590 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 ZNF547Q8IVP9 402 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 ZBTB2Q8N680 514 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 OR13H1Q8NG92 308 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 OR56A4Q8NGH8 313 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 DNASE2BQ8WZ79 361 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 LINC00615Q96LM1 132 aaPredicted RBP28.32■■■□□ 2.12
BRF1-213ENST00000548421 CCM2Q9BSQ5 444 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 C11orf16Q9NQ32 467 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 SMG5Q9UPR3 1016 aaKnown RBP28.32■■■□□ 2.12
BRF1-213ENST00000548421 SLCO1B1Q9Y6L6 691 aa28.32■■■□□ 2.12
BRF1-213ENST00000548421 SPAG17Q6Q759 2223 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 KPNA5O15131 536 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 TYROBPO43914 113 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 GSTM1P09488 218 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 COL6A2P12110 1019 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 CCR7P32248 378 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 CCT5P48643 541 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 RACK1P63244 317 aaKnown RBP28.31■■■□□ 2.12
BRF1-213ENST00000548421 GSTM4Q03013 218 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 SRSF5Q13243 272 aaKnown RBP28.31■■■□□ 2.12
BRF1-213ENST00000548421 TTLL9Q3SXZ7 439 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 CLEC14AQ86T13 490 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 LCA5Q86VQ0 697 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 ELMO1Q92556 727 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 TSNARE1Q96NA8 513 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 MIR1-1HGQ9H1L0 117 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 GPR27Q9NS67 375 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 DCDC2Q9UHG0 476 aa28.31■■■□□ 2.12
BRF1-213ENST00000548421 GON4LQ3T8J9 2241 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 PRPF4O43172 522 aaKnown RBP eCLIP28.3■■■□□ 2.12
BRF1-213ENST00000548421 GRID2O43424 1007 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 GLRA3O75311 464 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 GSTA1P08263 222 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 THEGLP0DJG4 465 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 MAOBP27338 520 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 AOAHP28039 575 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 CNR2P34972 360 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 CRHR1P34998 444 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 GMPRP36959 345 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 PTK2BQ14289 1009 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 ANGPT1Q15389 498 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 TPRG1LQ5T0D9 272 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 ENPP7Q6UWV6 458 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 ARMCX6Q7L4S7 300 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 RGL4Q8IZJ4 473 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 CENPLQ8N0S6 344 aaPredicted RBP28.3■■■□□ 2.12
BRF1-213ENST00000548421 SCARF2Q96GP6 870 aaPredicted RBP28.3■■■□□ 2.12
BRF1-213ENST00000548421 UBXN10Q96LJ8 280 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 FGF22Q9HCT0 170 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 KCNK9Q9NPC2 374 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 ZSCAN32Q9NX65 697 aa28.3■■■□□ 2.12
BRF1-213ENST00000548421 PCYT1BQ9Y5K3 369 aaPredicted RBP28.3■■■□□ 2.12
BRF1-213ENST00000548421 TNRC6BQ9UPQ9 1833 aaKnown RBP28.3■■■□□ 2.12
BRF1-213ENST00000548421 LRP4O75096 1905 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 SP9P0CG40 484 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 CCDC166P0CW27 439 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 NR1D1P20393 614 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 OAS2P29728 719 aaKnown RBP28.29■■■□□ 2.12
BRF1-213ENST00000548421 PMS2CLQ68D20 193 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 C11orf96Q7Z7L8 435 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 SPNS2Q8IVW8 549 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 CPNE9Q8IYJ1 553 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 SLC22A18ASQ8N1D0 253 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 PLD6Q8N2A8 252 aaKnown RBP28.29■■■□□ 2.12
BRF1-213ENST00000548421 NKAPQ8N5F7 415 aaKnown RBP28.29■■■□□ 2.12
BRF1-213ENST00000548421 MFSD2AQ8NA29 543 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 KCTD4Q8WVF5 259 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 ANKRD49Q8WVL7 239 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 KLHDC7BQ96G42 594 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 SELENOSQ9BQE4 189 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 C1QTNF1Q9BXJ1 281 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 IQCGQ9H095 443 aaKnown RBP28.29■■■□□ 2.12
BRF1-213ENST00000548421 TM9SF3Q9HD45 589 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 ZNHIT2Q9UHR6 403 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 SUFUQ9UMX1 484 aa28.29■■■□□ 2.12
BRF1-213ENST00000548421 DNMT3AQ9Y6K1 912 aaPredicted RBP28.29■■■□□ 2.12
BRF1-213ENST00000548421 PRSS38A1L453 326 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 TNFRSF10CO14798 259 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 KMOO15229 486 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 HRO43593 1189 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 KLHL2O95198 593 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 TOP3BO95985 862 aaKnown RBP28.28■■■□□ 2.12
BRF1-213ENST00000548421 LTA4HP09960 611 aaKnown RBP28.28■■■□□ 2.12
BRF1-213ENST00000548421 CD38P28907 300 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms