RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 VPS11Q9H270 941 aa15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 SARS2Q9NP81 518 aaKnown RBP15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 MKS1Q9NXB0 559 aa15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 SUSD2Q9UGT4 822 aa15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 DCDC2Q9UHG0 476 aa15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 SMG5Q9UPR3 1016 aaKnown RBP15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 TMEM98Q9Y2Y6 226 aa15.6■□□□□ 0.09
TRAFD1-203ENST00000547063 THADAQ6YHU6 1953 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CCDC189A1A4V9 331 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 H0Y8X5 98 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 COPEO14579 308 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 GALR2O43603 387 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 DNAJC6O75061 913 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CEACAM5P06731 702 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 THEGLP0DJG4 465 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CBSLP0DN79 551 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ENO3P13929 434 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 BRAFP15056 766 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 GNSP15586 552 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 DGKAP23743 735 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CBSP35520 551 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 DHPSP49366 369 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CSRP3P50461 194 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CLCN7P51798 805 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CTSCP53634 463 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 IL2P60568 153 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 PDE1CQ14123 709 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 TEAD4Q15561 434 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 INSCQ1MX18 579 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 FAM83EQ2M2I3 478 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 TSNAXIP1Q2TAA8 658 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 PLEKHS1Q5SXH7 462 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 MTERF4Q7Z6M4 381 aaKnown RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 GALNT13Q8IUC8 556 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CEP97Q8IW35 865 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ZBTB2Q8N680 514 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ACVR1CQ8NER5 493 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 OR13H1Q8NG92 308 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CD200R1Q8TD46 325 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 SCARF2Q96GP6 870 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ZC3H10Q96K80 434 aaKnown RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 SLC6A18Q96N87 628 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 COL25A1Q9BXS0 654 aaPredicted RBP15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 MIR1-1HGQ9H1L0 117 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 PCMTD2Q9NV79 361 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 KLQ9UEF7 1012 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ZNHIT2Q9UHR6 403 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 CA5BQ9Y2D0 317 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 MED16Q9Y2X0 877 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 KMT2EQ8IZD2 1858 aa15.59■□□□□ 0.09
TRAFD1-203ENST00000547063 ABCA7Q8IZY2 2146 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 PRSS38A1L453 326 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 MGAT4DA6NG13 374 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 TMEM202A6NGA9 273 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 IQCF5A8MTL0 148 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 GOLGA8RI6L899 631 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 LIN7AO14910 233 aaPredicted RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 PHGDHO43175 533 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SGTAO43765 313 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 GLRA3O75311 464 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 LTA4HP09960 611 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SLC35E2BP0CK96 405 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 ZNF37AP17032 561 aaPredicted RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 AOAHP28039 575 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 BLKP51451 505 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 AFF3P51826 1226 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 LRP8Q14114 963 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 PLK5Q496M5 336 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SYTL3Q4VX76 610 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 AGAP9Q5VTM2 703 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 KLC3Q6P597 504 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 ENPP7Q6UWV6 458 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SH2D5Q6ZV89 423 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 RABEPKQ7Z6M1 372 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 KRT222Q8N1A0 295 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 C4orf33Q8N1A6 199 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 ARFGAP2Q8N6H7 521 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SIDT2Q8NBJ9 832 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 HM13Q8TCT9 377 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 ELMO1Q92556 727 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 TMEM159Q96B96 161 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 APOPT1Q96IL0 206 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 TIMM29Q9BSF4 260 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 TM9SF3Q9HD45 589 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 GPR27Q9NS67 375 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 MOSPD1Q9UJG1 213 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
TRAFD1-203ENST00000547063 SPTY2D1-AS1A0A0U1RR47 76 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 A0A1W2PR77 199 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 FAM86C2PA6NEL3 165 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 BCAT2O15382 392 aaPredicted RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 PRPF4O43172 522 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 HRO43593 1189 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 LILRB5O75023 590 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 POP7O75817 140 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 KLHL2O95198 593 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 CCDC166P0CW27 439 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 ITGB6P18564 788 aa15.57■□□□□ 0.08
TRAFD1-203ENST00000547063 MAOBP27338 520 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms