RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KYQ8NBH2 561 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 WDR48Q8TAF3 677 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ART4Q93070 314 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 LRRC1Q9BTT6 524 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 PHACTR1Q9C0D0 580 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 VPS37BQ9H9H4 285 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 GRHL1Q9NZI5 618 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 ACSL5Q9ULC5 683 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 KCNK6Q9Y257 313 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 MAD1L1Q9Y6D9 718 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
DDX54-203ENST00000546869 CACNA1AO00555 2505 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 MYLKQ15746 1914 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 B4DGG1 531 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 EIF3HO15372 352 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDX54-203ENST00000546869 ZW10O43264 779 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 OR56A5P0C7T3 313 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 RPS3P23396 243 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDX54-203ENST00000546869 MRPS25P82663 173 aaKnown RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 FOXK2Q01167 660 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 SEMA3AQ14563 771 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 TCEA2Q15560 299 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 SMAD1Q15797 465 aaKnown RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 LONRF1Q17RB8 773 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 TYSND1Q2T9J0 566 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 SPANXN3Q5MJ09 141 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 RNF187Q5TA31 235 aaPredicted RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 NEPROQ6NW34 567 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 GUSBP11Q6P575 273 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 IFI44Q8TCB0 444 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 CCDC97Q96F63 343 aaPredicted RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 CCM2Q9BSQ5 444 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 FAM129AQ9BZQ8 928 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 SARS2Q9NP81 518 aaKnown RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 PRDM8Q9NQV8 689 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 SIRPGQ9P1W8 387 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 MARCH4Q9P2E8 410 aaPredicted RBP14.22□□□□□ -0.13
DDX54-203ENST00000546869 LRIT1Q9P2V4 623 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 WASF3Q9UPY6 502 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
DDX54-203ENST00000546869 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 CPED1A4D0V7 1026 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 PRMT5O14744 637 aaPredicted RBP14.21□□□□□ -0.13
DDX54-203ENST00000546869 EML2O95834 649 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 PMLP29590 882 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 ELK3P41970 407 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 GPR3P46089 330 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
DDX54-203ENST00000546869 RPA4Q13156 261 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 SQSTM1Q13501 440 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 BBS9Q3SYG4 887 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.21□□□□□ -0.13
DDX54-203ENST00000546869 STEAP4Q687X5 459 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 XKR5Q6UX68 686 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 DET1Q7L5Y6 550 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 EFL1Q7Z2Z2 1120 aaKnown RBP14.21□□□□□ -0.13
DDX54-203ENST00000546869 SLC9B2Q86UD5 537 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 TMPRSS12Q86WS5 348 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 CILP2Q8IUL8 1156 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 IGDCC3Q8IVU1 814 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 CLDN19Q8N6F1 224 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDX54-203ENST00000546869 GABPB2Q8TAK5 448 aaPredicted RBP14.21□□□□□ -0.13
DDX54-203ENST00000546869 HM13Q8TCT9 377 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 MAPK15Q8TD08 544 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 SH3KBP1Q96B97 665 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 CARD6Q9BX69 1037 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 P2RY12Q9H244 342 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 L2HGDHQ9H9P8 463 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 UCK1Q9HA47 277 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 PRSS21Q9Y6M0 314 aa14.21□□□□□ -0.13
DDX54-203ENST00000546869 DCHS1Q96JQ0 3298 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
DDX54-203ENST00000546869 OPA1O60313 960 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 OR1I1O60431 355 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 NDUFS3O75489 264 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 FTH1P02794 183 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 MYF5P13349 255 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 BRAFP15056 766 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 NFE2L1Q14494 772 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 CRYMQ14894 314 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
DDX54-203ENST00000546869 PLA2G4EQ3MJ16 856 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 PERM1Q5SV97 790 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 CDCP2Q5VXM1 449 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
DDX54-203ENST00000546869 CYS1Q717R9 158 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 CENPUQ71F23 418 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 TMPRSS7Q7RTY8 843 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 SFTPA2Q8IWL1 248 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 RBM12BQ8IXT5 1001 aaKnown RBP14.2□□□□□ -0.14
DDX54-203ENST00000546869 GALNT15Q8N3T1 639 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 SLC37A2Q8TED4 501 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 ZFPM2Q8WW38 1151 aa14.2□□□□□ -0.14
DDX54-203ENST00000546869 CCDC3Q9BQI4 270 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms