RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZNF717Q9BY31 904 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 RDH8Q9NYR8 311 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 NUP50Q9UKX7 468 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 POFUT2Q9Y2G5 429 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TCAF1Q9Y4C2 921 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 KCNE2Q9Y6J6 123 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SERPINA3P01011 423 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CYP2A6P11509 494 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 IL7P13232 177 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 RORAP35398 523 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 EFEMP1Q12805 493 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 GRIK2Q13002 908 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 IFI44LQ53G44 452 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CPTPQ5TA50 214 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 DCAF12L1Q5VU92 463 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 MIB1Q86YT6 1006 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 PARP8Q8N3A8 854 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CCDC107Q8WV48 283 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 FDXACB1Q9BRP7 624 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 RPP40O75818 363 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ALDH1A2O94788 518 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 SNX4O95219 450 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 PKMP14618 531 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 HPGDP15428 266 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 FPR1P21462 350 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CCNCP24863 283 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ADRA1BP35368 520 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CDH15P55291 814 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 PLEKHG7Q6ZR37 379 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CHST15Q7LFX5 561 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 VSIG10LQ86VR7 867 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CHERPQ8IWX8 916 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 DENND1AQ8TEH3 1009 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 TBC1D14Q9P2M4 693 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CCNB2O95067 398 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 RAB39AQ14964 217 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ALFQ53S48 1182 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ZYG11BQ9C0D3 744 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ATXN3LQ9H3M9 355 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 TFB2MQ9H5Q4 396 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 HOXA2O43364 376 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CPNE3O75131 537 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 PSKH1P11801 424 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 IMPDH1P20839 514 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 HNRNPDQ14103 355 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 AMHR2Q16671 573 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 SLC9B1Q4ZJI4 515 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 RHBDF2Q6PJF5 856 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 USP30Q70CQ3 517 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 GALNT5Q7Z7M9 940 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 PIGZQ86VD9 579 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ZC3H7AQ8IWR0 971 aaKnown RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 MAPKAP1Q9BPZ7 522 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 USP29Q9HBJ7 922 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 CCM2LQ9NUG4 571 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-212ENST00000546744 HSPB11Q9Y547 144 aa12.66□□□□□ -0.38
PTCH1-212ENST00000546744 TISP43B9A030 160 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 NR2F1P10589 423 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PIK3CBP42338 1070 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 BACE1P56817 501 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GCNT6Q5T4J0 391 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 FAAH2Q6GMR7 532 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 OAFQ86UD1 273 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 KIF18BQ86Y91 864 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 CPNE9Q8IYJ1 553 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 SCML4Q8N228 414 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 POLR2J2Q9GZM3 115 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 EIF3KQ9UBQ5 218 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 CD86P42081 329 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GLUD2P49448 558 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PTPN5P54829 565 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 BCL2L1Q07817 233 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ADAM15Q13444 863 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 EFR3AQ14156 821 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 COQ5Q5HYK3 327 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms