RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 DLGAP1O14490 977 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 TFECO14948 347 aaPredicted RBP14.5□□□□□ -0.09
HOXC11-202ENST00000546378 MAFKO60675 156 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 POU2F1P14859 743 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 AZGP1P25311 298 aaKnown RBP14.5□□□□□ -0.09
HOXC11-202ENST00000546378 HOXD10P28358 340 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 POLR2JP52435 117 aaKnown RBP14.5□□□□□ -0.09
HOXC11-202ENST00000546378 GALNT2Q10471 571 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 DCAF4L1Q3SXM0 396 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 ANKS6Q68DC2 871 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 TXNDC11Q6PKC3 985 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 CRYBG2Q8N1P7 616 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 BDH2Q9BUT1 245 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 SDK1Q7Z5N4 2213 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 A0A0D9SEW6 157 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 TCRBV3S1A0A5B6 114 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 PTGESO14684 152 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 DNTTP04053 509 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 ALDH3B2P48448 385 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 NEK2P51955 445 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 CDK18Q07002 472 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 PWP1Q13610 501 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 FAM174BQ3ZCQ3 159 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 AHSA2Q719I0 299 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 LARP4Q71RC2 724 aaKnown RBP eCLIP14.5□□□□□ -0.09
HOXC11-202ENST00000546378 CACTIN-AS1Q8N1I8 211 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 RNF175Q8N4F7 328 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 TANKQ92844 425 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 NFKBIZQ9BYH8 718 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 TM6SF2Q9BZW4 377 aa14.5□□□□□ -0.09
HOXC11-202ENST00000546378 MBLAC1A4D2B0 266 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 MGAMO43451 1857 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 AP1G1O43747 822 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 ECI2O75521 394 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 C1QCP02747 245 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 THRBP10828 461 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 IMPDH1P20839 514 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 HSPA7P48741 367 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 KCNAB2Q13303 367 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 FAM187BQ17R55 369 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 COLEC12Q5KU26 742 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 BROXQ5VW32 411 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 SLC22A16Q86VW1 577 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 CILP2Q8IUL8 1156 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 RBM12BQ8IXT5 1001 aaKnown RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 POC5Q8NA72 575 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 CSF3RQ99062 836 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 C11orf84Q9BUA3 381 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 EXOSC4Q9NPD3 245 aaKnown RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 GIN1Q9NXP7 522 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 GTF2IRD1Q9UHL9 959 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 A0A087X1B8 175 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 SLC12A8A0AV02 714 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 RGS5O15539 181 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 MYO1DO94832 1006 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 OXSR1O95747 527 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 C8BP07358 591 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 HOXD8P13378 290 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TCEA1P23193 301 aaKnown RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 MRPS6P82932 125 aaKnown RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 RNF180Q86T96 592 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 DTWD1Q8N5C7 304 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 LRRC52Q8N7C0 313 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 EEF1AKMT1Q8WVE0 214 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 PYCR2Q96C36 320 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 LINGO1Q96FE5 620 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TSPAN17Q96FV3 270 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 REXO4Q9GZR2 422 aaKnown RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 KIF17Q9P2E2 1029 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 LOXHD1Q8IVV2 1947 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TARM1B6A8C7 271 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 HK2P52789 917 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 CRYBB1P53674 252 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 SPATC1Q76KD6 591 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 SYVN1Q86TM6 617 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TTC39CQ8N584 583 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 C2CD4AQ8NCU7 369 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 ABHD11Q8NFV4 315 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 OR13J1Q8NGT2 312 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 ULK4Q96C45 1275 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 CCDC97Q96F63 343 aaPredicted RBP14.49□□□□□ -0.09
HOXC11-202ENST00000546378 BEX2Q9BXY8 128 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 TPK1Q9H3S4 243 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 EPB41L1Q9H4G0 881 aa14.49□□□□□ -0.09
HOXC11-202ENST00000546378 FXYD1O00168 92 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 HAS3O00219 553 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 PIRO00625 290 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 NPHS1O60500 1241 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 INHAP05111 366 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 IDH2P48735 452 aaKnown RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 HERVK_113P63132 956 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ENPEPQ07075 957 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF829Q3KNS6 432 aaPredicted RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 FAM180BQ6P0A1 224 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 PELI3Q8N2H9 469 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ATG16L2Q8NAA4 619 aa14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF784Q8NCA9 323 aaPredicted RBP14.48□□□□□ -0.09
HOXC11-202ENST00000546378 ZNF540Q8NDQ6 660 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms