RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KLF6Q99612 283 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 FRMD8Q9BZ67 464 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 IL22Q9GZX6 179 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CDH19Q9H159 772 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 WDR26Q9H7D7 661 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SYBUQ9NX95 663 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 KCTD5Q9NXV2 234 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 GRHL1Q9NZI5 618 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BFARQ9NZS9 450 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 IL17CQ9P0M4 197 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 WHRNQ9P202 907 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CD84Q9UIB8 345 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PILRBQ9UKJ0 227 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SNX24Q9Y343 169 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TCAF1Q9Y4C2 921 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ARID1BQ8NFD5 2236 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ARHGEF17Q96PE2 2063 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CCDC78A2IDD5 438 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 POM121BA6NF01 834 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MROH6A6NGR9 719 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PRR5-ARHGAP8B1AHC4 643 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PROB1E7EW31 1015 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 K7ESM1 405 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 FPGTO14772 594 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 STX7O15400 261 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 GPR39O43194 453 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 AVILO75366 819 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PRAMEF1O95521 474 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SOD1P00441 154 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CFIP05156 583 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PYGLP06737 847 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 RETP07949 1114 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 TEAD1P28347 426 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CD38P28907 300 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CD96P40200 585 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 HADHAP40939 763 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 RABIFP47224 123 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PFN3P60673 137 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CDK3Q00526 305 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 GUCY2DQ02846 1103 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 DPTQ07507 201 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 OVGP1Q12889 678 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 LAMB3Q13751 1172 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 STAT4Q14765 748 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 GLE1Q53GS7 698 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 DNAJC21Q5F1R6 531 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 TEX35Q5T0J7 233 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ARMC3Q5W041 872 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ZDHHC20Q5W0Z9 365 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PDPK2PQ6A1A2 396 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 TCEAL6Q6IPX3 200 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CASC4Q6P4E1 433 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 FAM151BQ6UXP7 276 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MACC1Q6ZN28 852 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 NLRP9Q7RTR0 991 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ERMP1Q7Z2K6 904 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 IQCHQ86VS3 1027 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 HEATR4Q86WZ0 1026 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PDIK1LQ8N165 341 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SLC22A18ASQ8N1D0 253 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PELI3Q8N2H9 469 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CBARPQ8N350 705 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MFSD4AQ8N468 514 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PLA2G15Q8NCC3 412 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 GPR26Q8NDV2 337 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 OR4K2Q8NGD2 314 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 OR13C4Q8NGS5 318 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 OR13J1Q8NGT2 312 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 PEX13Q92968 403 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 TCEAL3Q969E4 200 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CENPTQ96BT3 561 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 C19orf43Q9BQ61 176 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 LRRC1Q9BTT6 524 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ZSCAN5AQ9BUG6 496 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 RIOK2Q9BVS4 552 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ABCG8Q9H221 673 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ARRDC1-AS1Q9H2J1 176 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MRM3Q9HC36 420 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 BPIFA1Q9NP55 256 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MBNL1Q9NR56 388 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 GPR27Q9NS67 375 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
PRKDC-211ENST00000546304 TMEM74BQ9NUR3 256 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SAMD15Q9P1V8 674 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 NCDNQ9UBB6 729 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 ANAPC5Q9UJX4 755 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 OR1A2Q9Y585 309 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
PRKDC-211ENST00000546304 SPTBN2O15020 2390 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 A0A1B0GVT2 93 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 A0A1W2PR77 199 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 FADS2P1A8MWK0 482 aa6.27□□□□□ -1.41
PRKDC-211ENST00000546304 PATE3B3GLJ2 98 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms