RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 BANF1O75531 89 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 USP1O94782 785 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 ADRB1P08588 477 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 OR56A5P0C7T3 313 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 F3P13726 295 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 RPL10P27635 214 aaKnown RBP16.53■□□□□ 0.24
LTBR-215ENST00000546296 HALP42357 657 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 PRLHRP49683 370 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 DRG2P55039 364 aaKnown RBP16.53■□□□□ 0.24
LTBR-215ENST00000546296 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 NFE2L1Q14494 772 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 SEMA3AQ14563 771 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 LONRF1Q17RB8 773 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 PERM1Q5SV97 790 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 NEPROQ6NW34 567 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 PACS1Q6VY07 963 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 CFAP206Q8IYR0 622 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 NAGSQ8N159 534 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 CEP112Q8N8E3 955 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 Q8N9G6 341 aaPredicted RBP16.53■□□□□ 0.24
LTBR-215ENST00000546296 OR2L2Q8NH16 312 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 CCDC3Q9BQI4 270 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 STN1Q9H668 368 aaKnown RBP16.53■□□□□ 0.24
LTBR-215ENST00000546296 SYNDIG1Q9H7V2 258 aa16.53■□□□□ 0.24
LTBR-215ENST00000546296 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
LTBR-215ENST00000546296 KIR2DS5A0A0G2JLQ3 304 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 A0A0G2JNG1 304 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 KIR2DS3K7RE56 304 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 QSOX1O00391 747 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ZW10O43264 779 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 NUDT21O43809 227 aaKnown RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 OPA1O60313 960 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 DKK1O94907 266 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 TTC4O95801 387 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 FTH1P02794 183 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ARNTP27540 789 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ELK3P41970 407 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ARCN1P48444 511 aaKnown RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 CAV1Q03135 178 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 DMPKQ09013 629 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 KIR2DS5Q14953 304 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ZNF449Q6P9G9 518 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 FAM83HQ6ZRV2 1179 aaPredicted RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 RAB44Q7Z6P3 723 aaPredicted RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 SLC9B2Q86UD5 537 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 C17orf82Q86X59 251 aaPredicted RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 CCNJLQ8IV13 435 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 TRIM48Q8IWZ4 208 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 SFRP1Q8N474 314 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■■■■■ 95.3
LTBR-215ENST00000546296 SLC37A2Q8TED4 501 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 LRRC39Q96DD0 335 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 CFAP36Q96G28 342 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 LINC00615Q96LM1 132 aaPredicted RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 IL1RAPL1Q9NZN1 696 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ZC3H7BQ9UGR2 993 aaKnown RBP16.52■□□□□ 0.24
LTBR-215ENST00000546296 ACSL5Q9ULC5 683 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 PRSS21Q9Y6M0 314 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 FAM169AQ9Y6X4 670 aa16.52■□□□□ 0.24
LTBR-215ENST00000546296 ARID1BQ8NFD5 2236 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 DCHS1Q96JQ0 3298 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 ZNF106Q9H2Y7 1883 aaKnown RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 ZCWPW2A0A1B0GU75 182 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 C17orf113A0A1B0GUU1 675 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 MED19A0JLT2 244 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 A6NCN8 305 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 HYAL3O43820 417 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 PPM1FP49593 454 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 PLTPP55058 493 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 PDIA2Q13087 525 aaKnown RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 SPANXN3Q5MJ09 141 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 AGAP9Q5VTM2 703 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 METRNLQ641Q3 311 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 PTRHD1Q6GMV3 140 aaKnown RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 ABRAXAS1Q6UWZ7 409 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 WASH2PQ6VEQ5 465 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 CENPUQ71F23 418 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 ANKMY2Q8IV38 441 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 IGDCC3Q8IVU1 814 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 GPR150Q8NGU9 434 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 HM13Q8TCT9 377 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 CXorf40BQ96DE9 158 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 TCF12Q99081 682 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 CARD6Q9BX69 1037 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 TSSK1BQ9BXA7 367 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 WASH6PQ9NQA3 447 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 GRHL1Q9NZI5 618 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 SCHIP1Q9P0W5 487 aaPredicted RBP16.51■□□□□ 0.23
LTBR-215ENST00000546296 PSMD13Q9UNM6 376 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 CHMP2BQ9UQN3 213 aa16.51■□□□□ 0.23
LTBR-215ENST00000546296 UBA6A0AVT1 1052 aaPredicted RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 PRR19A6NJB7 356 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 PRMT5O14744 637 aaPredicted RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 PPM1DO15297 605 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 TP73O15350 636 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 VIPP01282 170 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 GSTM1P09488 218 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms