RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HEBP1Q9NRV9 189 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RGS18Q9NS28 235 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM39AQ9NV64 488 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CMTM6Q9NX76 183 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TAS2R13Q9NYV9 303 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 POLG2Q9UHN1 485 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PSME2Q9UL46 239 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PCDHGB1Q9Y5G3 927 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 DNAJC15Q9Y5T4 150 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 AP1M2Q9Y6Q5 423 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 MYBPHLA2RUH7 354 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 C17orf102A2RUQ5 167 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CCDC154A6NI56 674 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 E9PAM4 449 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PIP5K1BO14986 540 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 INPPL1O15357 1258 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SNX2O60749 519 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PMPCBO75439 489 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SLC22A3O75751 556 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CLPXO76031 633 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SCELO95171 688 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 BCL10O95999 233 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PEX11BO96011 259 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MT-CYBP00156 380 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ALDOCP09972 364 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CCDC159P0C7I6 412 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 THRBP10828 461 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 HGFP14210 728 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CKMT2P17540 419 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ITIH1P19827 911 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CD33P20138 364 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CAPN3P20807 821 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 KCNA5P22460 613 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GRK3P35626 688 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CCR10P46092 362 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SERPINB10P48595 397 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GALK1P51570 392 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CLCN4P51793 760 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GSTM4Q03013 218 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 OCA2Q04671 838 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CLCQ05315 142 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 LIPEQ05469 1076 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 NFATC3Q12968 1075 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 DAG1Q14118 895 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF846Q147U1 533 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 RAB39AQ14964 217 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 C16orf72Q14CZ0 275 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ACOX1Q15067 660 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 RBM20Q5T481 1227 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF618Q5T7W0 954 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PRAMEF18Q5VWM3 479 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GRAMD4Q6IC98 578 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 UGT3A1Q6NUS8 523 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CYP2R1Q6VVX0 501 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 USP50Q70EL3 339 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ANKRD23Q86SG2 305 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 DPP9Q86TI2 863 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TRIM74Q86UV6 250 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TRIM73Q86UV7 250 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MON1AQ86VX9 555 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZFAND4Q86XD8 727 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TP53INP2Q8IXH6 220 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 C8orf59Q8N0T1 100 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 STK40Q8N2I9 435 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM130Q8N3G9 435 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 FBXO39Q8N4B4 442 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PTGR2Q8N8N7 351 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ARRDC4Q8NCT1 418 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 FAM156AQ8NDB6 213 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF555Q8NEP9 628 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PJA1Q8NG27 643 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 OR13J1Q8NGT2 312 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TBC1D15Q8TC07 691 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GIPC3Q8TF64 312 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CYGBQ8WWM9 190 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GATAD2BQ8WXI9 593 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 NDRG1Q92597 394 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF566Q969W8 418 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MYLPFQ96A32 169 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 VPS33AQ96AX1 596 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 TUBGCP3Q96CW5 907 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 VMP1Q96GC9 406 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SLC39A13Q96H72 371 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PDLIM5Q96HC4 596 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CELF6Q96J87 481 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PLEKHA8Q96JA3 519 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 BTN2A3PQ96KV6 586 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 C8orf48Q96LL4 319 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF347Q96SE7 839 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF382Q96SR6 550 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PKMYT1Q99640 499 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 RBM4BQ9BQ04 359 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 LPIN3Q9BQK8 851 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 RBM4Q9BWF3 364 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 POLR1EQ9GZS1 481 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ZCWPW1Q9H0M4 648 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 EPS8L2Q9H6S3 715 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms