RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ASCL3Q9NQ33 180 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 POT1Q9NUX5 634 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 SCHIP1Q9P0W5 487 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 ZNF624Q9P2J8 865 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 ACSL5Q9ULC5 683 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 RIMKLBQ9ULI2 386 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 MYLKQ15746 1914 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 FREM2Q5SZK8 3169 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 USP24Q9UPU5 2620 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TRBV5-4A0A0C4DH59 114 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 GOLGA6L10A0A0M3HER8 536 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC78A2IDD5 438 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 LILRA5A6NI73 299 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 OR52A4PA6NMU1 304 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 HGSO14964 777 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 HOXB3P14651 431 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 BRAFP15056 766 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 PSMA3P25788 255 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 ACRV1P26436 265 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 SLC19A1P41440 591 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 CDK16Q00536 496 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 NFE2L1Q14494 772 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 CLCA4Q14CN2 919 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 METRNLQ641Q3 311 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 ZNF574Q6ZN55 896 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 TMEM26Q6ZUK4 368 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 PPHLN1Q8NEY8 458 aaKnown RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 OR2L2Q8NH16 312 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 ACTRT1Q8TDG2 376 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 HNRNPLLQ8WVV9 542 aaKnown RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 NCSTNQ92542 709 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 PEX13Q92968 403 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC97Q96F63 343 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 PRR11Q96HE9 360 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 LINC00615Q96LM1 132 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC74BQ96LY2 380 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 BFARQ9NZS9 450 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 PISDQ9UG56 409 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 WDR37Q9Y2I8 494 aa15.43■□□□□ 0.06
CCDC78-216ENST00000544996 IGLV3-16A0A075B6K0 115 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 PMS2P1A4D2B8 440 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CDRT15L2A8MXV6 281 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 AGRPO00253 132 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CES2O00748 559 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 HGFP14210 728 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 MPSTP25325 297 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CSF2RBP32927 897 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CSTF2P33240 577 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 PRLHRP49683 370 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CDKN1CP49918 316 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 ARSDP51689 593 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 SESN2P58004 480 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 SARNPP82979 210 aaKnown RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 TRIP13Q15645 432 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 TSTD2Q5T7W7 516 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 LYPLAL1Q5VWZ2 237 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 FAM83HQ6ZRV2 1179 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 JAMLQ86YT9 394 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 PLXDC1Q8IUK5 500 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 CFAP206Q8IYR0 622 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 AGBL5Q8NDL9 886 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 RCBTB1Q8NDN9 531 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 COG1Q8WTW3 980 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 HDAC10Q969S8 669 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 TBC1D10AQ9BXI6 508 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 IL22Q9GZX6 179 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 SLC40A1Q9NP59 571 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 FAM8A1Q9UBU6 413 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 PSMD13Q9UNM6 376 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 TCAF1Q9Y4C2 921 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 ARHGEF17Q96PE2 2063 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-216ENST00000544996 WDFY3Q8IZQ1 3526 aa15.42■□□□□ 0.06
CCDC78-216ENST00000544996 C17orf113A0A1B0GUU1 675 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC162PA2VCL2 907 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 QSOX1O00391 747 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 UBXN7O94888 489 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 AP2A2O94973 939 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 KRT14P02533 472 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 SLC35G4P0C7Q5 338 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 THRAP10827 490 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 AMD1P17707 334 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
CCDC78-216ENST00000544996 TPSB2P20231 275 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PPARGP37231 505 aaPredicted RBP15.41■□□□□ 0.06
CCDC78-216ENST00000544996 COILP38432 576 aaPredicted RBP15.41■□□□□ 0.06
CCDC78-216ENST00000544996 NSG1P42857 185 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 ABCG1P45844 678 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 NPY2RP49146 381 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PRAMEP78395 509 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CFHR1Q03591 330 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 GPS1Q13098 491 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 C16orf72Q14CZ0 275 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 TPSAB1Q15661 275 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 RPE65Q16518 533 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CYP1B1Q16678 543 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PCID2Q5JVF3 399 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 TMEM164Q5U3C3 297 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 TTC27Q6P3X3 843 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms